BiocManager::install("metagenomeSeq") 报错:77 -fpic -g -O2 -c blkest.f -o blkest.o

R包安装
* installing *source* package ‘KernSmooth’ ...
** package ‘KernSmooth’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
77  -fpic  -g -O2  -c blkest.f -o blkest.o
make: 77: Command not found
make: *** [blkest.o] Error 127
ERROR: compilation failed for package ‘KernSmooth’
* removing ‘/share/work/biosoft/R/R-v3.6.1/lib64/R/library/KernSmooth’
* installing *source* package ‘glmnet’ ...
** package ‘glmnet’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
77  -fpic  -g -O2  -c glmnet5dpclean.f -o glmnet5dpclean.o
make: 77: Command not found
make: *** [glmnet5dpclean.o] Error 127
ERROR: compilation failed for package ‘glmnet’
* removing ‘/share/work/biosoft/R/R-v3.6.1/lib64/R/library/glmnet’
ERROR: dependency ‘KernSmooth’ is not available for package ‘gplots’
* removing ‘/share/work/biosoft/R/R-v3.6.1/lib64/R/library/gplots’
ERROR: dependencies ‘glmnet’, ‘gplots’ are not available for package ‘metagenomeSeq’
* removing ‘/share/work/biosoft/R/R-v3.6.1/lib64/R/library/metagenomeSeq’


77 命令其实就是:gfortran 命令,做个软连接:就可以解决:


attachments-2020-10-gAHaTfoJ5f8d2ff5ed925.png

  • 发表于 2020-10-19 14:18
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  • 分类:R

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omicsgene
omicsgene

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