...你好，在用ALLHIC1或者2的时候都报错，均有显示[E::idx_find_and_load] Could not retrieve index file for '/work/genome/assembly/output/docker/GM/30.ALLHiC2/sample.bwa_mem.bam'。但该地址下是有该文件的。
第二个问题是ALLHIC1时形成了sample.clean.counts_GATC.13g1.txt...
...述信息可有可无
Sequences are expected to be represented in the standard IUB/IUPAC amino acid and nucleic acid codes, with these exceptions:
lower-case letters are accepted and are mapped into upper-case;a single hyphen or dash can be used to represent a gap of indeterminate length;in am...
...文献下载：Identification of mapk gene family in Lateolabrax maculatus and their expression profiles in response to hypoxia and salinity challenges.pdf（点此题目下载原文）
基因家族分析发文章溜不溜？口说无凭，以文章为据！基因家族分析学习链接：基因...
... Zhu, Yi Guan, Tommy Tsan-Yuk Lam.
ggtree: an R package for visualization and annotation of phylogenetic
trees with their covariates and other associated data. Methods in
Ecology and Evolution. 2017, 8(1):28-36. doi:10.1111/2041-210X.12628
Guangchuang Yu. Using ggtree to visualize data on tree...
... [end of output]
note: This error originates from a subprocess, and is likely not a problem with pip.
error: subprocess-exited-with-error
× Getting requirements to build editable did not run successfully.
│ exit code: 1
╰─> See above for output.
note: This error origina...
...exit
-e filepath, --edge filepath
input the edge information of network,[required]
-v filepath, --vertex filepath
input the vertex information of network,[required]
-f from, --from from the name of the start gene column [required]
-t to, --to ...
...ific BLAS/LAPACK not found. Using system-independent EJML for DoubleMatrix operations.
[Thread-9] INFO net.maizegenetics.pipeline.TasselPipeline - net.maizegenetics.analysis.association.FixedEffectLMPlugin: time: Feb 16, 2024 15:09:52: progress: 0%
[Thread-9] INFO net.maizegenetics.pipeline.Tassel...
... siteBeta ValueRepresents the ratio between the methylated array intensity and total array intensity, falls between 0 (lower levels of methylation) and 1 (higher levels of methylation)ChromosomeThe chromosome in which the probe binding site is locatedStartThe start of the CpG site on the chromosomeE...
...ed between creating '/home/wy/rawdata/am-test/data/my_ampliseq/tmp/qiime2' and setting permissions on it.The above exception was the direct cause of the following exception:Traceback (most recent call last): File "/root/miniconda3/envs/qiime2-amplicon-2024.2/lib/python3.8/site-packages/q2cli/click...
...distribution.## ExtractingIf you have not already extract the distribution and cd into the cactus directory:```tar -xzf cactus-bin-v2.9.9.tar.gzcd cactus-bin-v2.9.9```## GPU Patch:When using GPU support since v2.9.4, please make sure to pass in the patched config file with `--configFile` (download t...