Comparative and population genomic landscape of Phellinus noxius: A hypervariable fungus causing root rot in trees.
二代和三代组装方法，以及基因预测方法
Genome assembly
Genome assembly of different species was carried out with Falcon (ver 0.5.0; Chin et al., 2016) and
were imp...
...-3-3蛋白序列作为种子序列：
题目：Genome-wide identification and characterization of the 14–3-3 family in Vitis vinifera L. during berry development and cold- and heat-stress response
https://bmcgenomics.biomedcentral.com/articles/10.1186/s12864-018-4955-8
搜索方法演示...
...ix.misa $od/$outprefix.misa.statistics");###########################primer design ###############################open IN,"$od/$outprefix.misa" or die "$!";open OUT,">$od/primer3.input" or die "$!";my%ssr_pos=(); #ssr相关信息my%SSR=(); # SSR type while(my$line=){chomp $line;my@tmp=split(/\t/,...
...C 6.4.0] on linuxType "help", "copyright", "credits" or "license" for more information.>>> import rpy2.robjects as robjError: package or namespace load failed for ‘methods’ in dyn.load(file, DLLpath = DLLpath, ...): unable to load shared object '/share/work/biosoft/R/R-v4.0.3/lib64/R/l...
...
HMMER is used for searching sequence databases for sequence homologs, and for making sequence alignments. It implements methods using probabilistic models called profile hidden Markov models (profile HMMs).
HMMER is often used together with a profile database, such as Pfam or many of the datab...
...apoptional arguments: -h, --help show this help message and exit -i filepath, --input filepath input the immune res data,[required] -m filepath, --metadata filepath input metadata file path[required] -g gr...