...Robert C. Edgar
http://www.drive5.com/muscle
This software is donated to the public domain.
Please cite: Edgar, R.C. Nucleic Acids Res 32(5), 1792-97.
1 2 seqs, max length 19, avg length 15
00:00:00 11 MB(-1%) Iter 1 100.00% K-mer dist pass 1
00:00:00 11 MB(-1%) Iter ...
...ks from file
/home/manager/gene_family/circos/genome.txt
but the maximum is currently set at [25000]. To increase this number change
max_links in etc/housekeeping.conf. Keep in mind that drawing that many links
may create an image that is too busy and uninterpretable.
请...
... (kmer_coverage_model.cpp : 218) Too many erroneous kmers, the estimates might be unreliable
* 0:07:10.518 1785M / 18G WARN General (kmer_coverage_model.cpp : 327) Valley value was estimated improperly, reset to 3
* 0:07:10.523 1785...
...128: BiopythonWarning: You may be importing Biopython from inside the source tree. This is bad practice and might lead to downstream issues. In particular, you might encounter ImportErrors due to missing compiled C extensions. We recommend that you try running...
...g data for project TCGA-STAD
GDCdownload will download 407 files. A total of 105.663384 MB
Downloading as: Sun_Aug__5_19_35_20_2018.tar.gz
Downloading: 110 MB >
> # 保存结果，方便后面使用
> data <- GDCprepare(query = query,
+ ...
...ot.nodeName=='pathway': for i in root.childNodes: if i.nodeType==1: if i.nodeName=='entry': link=i.getAttribute('link')
#print link+'\n'
for g in i.childNodes: if g.nodeName=='gra...
error during connect: In the default daemon configuration on Windows, the docker client must be run with elevated privileges to connect.: Get "http://%2F%2F.%2Fpipe%2Fdocker_engine/v1.24/images/search?limit=25&term=omicsclass": open //./pipe/docker_engine: The system cannot find the file specifi...