...a reference transcript4eSingle exon transfrag overlapping a reference exon and at least 10 bp of a reference intron, indicating a possible pre-mRNA fragment.5iA transfrag falling entirely within a reference intron6oGeneric exonic overlap with a reference transcript7pPossible polymerase run-on fragme...
...
Liu Y, Cui J, Zhou X, et al. Genome-wide identification, characterization and expression analysis of the TLP gene family in melon (Cucumis melo L.)[J]. Genomics, 2020.
重点福利来了！
组学大讲堂专注于生物信息培训，已有20000+的线上网课学员和1000+的线下培训学员...
...t_taxid_uniref.pl division.dmp nodes.dmp uniref90.fasta.gz ./
for i in PLN MAM INV PHG PRI ROD SYN UNA VRL VRT ENV BCT ;do
diamond makedb --in ${i}_uniref90.fa -d ${i}_uniref90.fa
done
...居然有11分的文献引用！
Lee H Y, Back K. Melatonininduction and its role in high light stress tolerance in Arabidopsis thaliana [J]. Journal of pineal research, 2018.
这个J Pineal Res期刊，2018年IF=11.613，也是很牛了！！
学霸姐姐大致看了一下，这篇文章主...
...mloptional arguments: -h, --help show this help message and exit -i count, --count count input read count file , csv or tsv format[ optional] --sep sep the field separator character for count file; Values ...
...格，后续的分析就很好展开了。
参考文献：[1] T. Magoc and S. Salzberg. FLASH: Fast length adjustment of short reads to improve genome assemblies. Bioinformatics 27:21 (2011), 2957-63.[2] Patrick D. Schloss,et al. Introducing mothur: Open-Source, Platform-Independent, Community-...
...access to an unmodified copy of data that was previously stored in CGHub andin the TCGA Data Portal hosted by the TCGA Data Coordinating Center (DCC), in which uses as references GRCh37 (hg19) and GRCh36 (hg18).
GDC harmonized database: data available was harmonized against GRCh38 (hg38) using G...
...表我的分组信息这些都是准确的
这个代码不报错
for i in {2..6};do Rscript $scriptdir/meta_stat.r -i ../05.export_data/taxa_summary/absolute_abundance/feature_table_tax_L$i.txt \ -m $metadata -t Group \ -a WSD_Lig_PPI -b WSD_PPI \ -o meta_stat --name WSD_Ligatu...