找到约 15 条结果

文章 CLUMPAK安装

...的,如果你啥也没有,新装的perl,就需要这样 cpan Getopt::Long File::Slurp File::Path List::MoreUtils PDF::API2 PDF::Table File::Basename List::Permutor GD::Graph::lines GD::Graph::Data Getopt::Std List::Util File::Slurp Scalar::Util Statistics::Distributions Archive::Extract Data::Power...

问题 老师您好！用meme分析motif时显示zsh：no such file or directory:/biosoft/meme/meme-v4.12.0/bin/meme。该怎么解决这个问题呢？谢谢

...6000000 -mod anr -nmotifs 10 -minw 6 -maxw 100命令后显示zsh：no such file or directory:/biosoft/meme/meme-v4.12.0/bin/meme。该怎么解决这个问题呢？谢谢

文章 win10/win7系统下无法重命名和打开文件提示文件名太长怎么解决

...78_A379_A381_A406_A408_A409":"C_vs_W" } i=0 for dir_path, dir_names, file_names in os.walk(cwd): for file_name in file_names: p=os.path.join(dir_path,file_name) if len(file_name)>100: m=re.match(r'(.+_vs_[^\.]+)', file_name) vs=m.group(...

问题 Error correction and assembling warnings: * 0:12:28.935 6768M / 13G WARN General (kmer_coverage_model.cpp : 327) Valley value was estimated improperly, reset to 16

这问题有什么解决办法吗

问题 老师您好，我在做不同物种之间共线性分析的时候，在#绘制共线性图片：准备两个配置文件为输入文件出现如下错误：IOError: [Errno 2] No such file or directory: 'mcscan_layout'

我在做不同物种之间共线性分析的时候，在#绘制共线性图片：准备两个配置文件为输入文件出现如下错误：IOError: [Errno 2] No such file or directory: 'mcscan_layout' 目录下的文件

文章 亚型划分比较波浪图（桑基图）绘制

...lor [required] -o outdir, --outdir outdir output file directory [default cwd] -p prefix, --prefix prefix out file name prefix [default result] -H height, --height height the height of pic inches [default 5] -W width, --w...

问题 jcvi报错'LayoutLine' object has no attribute 'sizes'

...，请问老师应该怎么解决 Traceback (most recent call last):   File "/share/work/biosoft/python/Python3/lib/python3.9/runpy.py", line 197, in _run_module_as_main     return _run_code(code, main_globals, None,   File "/share/work/biosoft/python/Python3/lib/python3.9/runpy.py", line 87...

问题 Error correction and assembling warnings: * 0:12:28.935 6768M / 13G WARN General (kmer_coverage_model.cpp : 327) Valley value was estimated improperly, reset to 16

请问您这个谷值问题怎么解决的

问题 Admixture算STRUCTURE，出来的CV erro值随着K增大而递增是怎么回事，算了好几组数据都这样

...     --out plink #转换成admixture要求的bed格式 plink --noweb --file plink  --recode12 --out admixture \      --allow-extra-chr  --keep-allele-order #admixture 群体结构分析 for k in {2..8};do     echo "admixture -j2 -C 0.01 --cv admixture.ped $k >admixture.log$k.ou...

文章 R包 CandiHap 进行单倍型分析

...ds = T)#hmp <- read_vcf('test.vcf')           # or if you use vcf filehmp <- read_hmp("haplotypes.hmp")ovl <- findover(gr,hmp)pheno <- read_pheno("Phenotype.txt",sep="\t")hap <- snp2hap(pheno,ovl, hapname="Hap")## want to extract resultsHap_results <- results(hap, gene="Si9g4...

文章 diff比较两个文件的内容

...示文件之间的差异。下面是 diff 命令的基本用法： diff file1.txt file2.txt 这将比较 file1.txt 和 file2.txt 两个文件的内容，并显示它们之间的差异。如果文件相同，diff 命令不会输出任何内容。如果有差异，它将显示差异的具体位置...

问题 我用conda 根本安装不了软件，非常慢，比如UMI-tools

...根本摸不到头绪。。。。 raceback (most recent call last):   File "/disk2/user/yizhsu/biosoft/anaconda3/bin/umi_tools", line 5, in <module>     from pkg_resources import load_entry_point   File "/disk2/user/yizhsu/biosoft/anaconda3/lib/python3.9/site-packages/pkg_resources/__i...

问题 使用ensembl下载的人gff3文件进行基因家族分析时，保留编码蛋白基因的命令无法识别人的gff3文件（描述中为日志）

...oft/perl/perl-5.22.1/lib/site_perl/5.22.1/auto/share/dist/AGAT/config.yaml file 08/01/2024 at 10h36m50s usage: /share/work/biosoft/perl/latest/bin/agat_sp_filter_feature_by_attribute_value.pl --gff Homo_sapiens.GRCh38.112.chr.gff3.gz --attribute biotype --value protein_coding -t ! -o Homo_sapiens....

文章 hisat2-build报错：Error: Encountered internal HISAT2 exception (#1)

...a.toplevelDeleting "Mus_musculus_c57bl6nj.C57BL_6NJ_v1.dna.toplevel.1.ht2" file written during aborted indexing attempt.Deleting "Mus_musculus_c57bl6nj.C57BL_6NJ_v1.dna.toplevel.2.ht2" file written during aborted indexing attempt.Deleting "Mus_musculus_c57bl6nj.C57BL_6NJ_v1.dna.toplevel.3.ht2" file ...

问题 老师，您好，在用qiime2 运行dada2 时，报错

R version 4.1.1 (2021-08-10)  载入需要的程辑包：Rcpp Error: package or namespace load failed for ‘Rcpp’:  package ‘Rcpp’ was installed before R 4.0.0: please re-install it 错误: 无法载入程辑包‘Rcpp’ 停止执行