...发表在BMC Genomics上题为:Full-length transcriptome sequences and the identification of putative genes for flavonoid biosynthesis in safflower 的红花三代全长转录组文章。
背景:
红花(拉丁学名:Carthamus tinctorius L.),别名:红蓝花 、刺红花,菊科、...
在文献中《Global profiling of RNA-binding protein target
sites by LACE-seq》没有发现他们的LACE-seq数据,只找到了他们处理后的BigWig文件,使用数据GSM4094532_MVH_1oocyte_rep1.bigwig进行后续作图时,用ChIPseeker包进行注释后发现与文献中的结果差别...
...
参考文献:
Cheng B, Furtado A, Henry R J. Long-read sequencing ofthe coffee bean transcriptome reveals the diversity of full-length transcripts[J]. Gigascience, 2017, 6(11):1-13.
日常科研中你我经会常遇到看不懂的图表,不会挖掘的数据,没有思路的文章,沟通...
...是最大似然法,然后是最大简约法。
Hall BG. Comparison ofthe accuracies of several phylogenetic methods using protein and DNA sequences. Mol Biol Evol. 2005 Mar;22(3):792-802. doi: 10.1093/molbev/msi066. Epub 2004 Dec 8. Erratum in: Mol Biol Evol. 2005 Apr;22(4):1160. PMID: 15590907.
...ibrary/cpp11/include/cpp11/protect.hpp:186:5: warning: control reaches end of non-void function [-Wreturn-type] } ^make: *** [cpp11.o] Error 1ERROR: compilation failed for package ‘tidyr’
这个是因为R更新4版本以后的报错,而你的R版本是3.* 所以报...
...I, Whatmore P. Transcriptome profiling of lentil (Lens culinaris) through the first 24 hours of Ascochyta lentis infection reveals key defence response genes.[J].BMC genomics, 2018, 19(1):108.
日常科研中你我经会常遇到看不懂的图表,不会挖掘的数据,没有思路的文章...
...码和数据,前面出图和老师的一样,卡在这步
sft = pickSoftThreshold(datExpr0, powerVector = powers, verbose = 5)
pickSoftThreshold: will use block size 2938.
pickSoftThreshold: calculating connectivity for given powers...
..working on genes 1 through 2938 of 2938
Error i...
...lular Physiology and Biochemistry(IF=5.5)上题为Genome-Wide Analysis of Prognostic lncRNAs, miRNAs, and mRNAs Forming a Competing Endogenous RNA Network in Hepatocellular Carcinoma 的文章为例,详细介绍下该类文章的写作思路!
该文章思路清晰明了,分别针对癌症...