问题 16S 差异比较使用compare_errorbar.r的时候报错

...KD_Ligatur_ppiL6 > done --> Q&A for bioinformatics, please visit the website: https://www.omicsclass.com/ --> R beginners ? I suggest your learning R language: https://study.omicsclass.com/index Failed to create bus connection: No such file or directory ── Attaching core tidyverse...

文章 《Nature》发文描述几百万年间柑橘如何从喜马拉雅山到我们的餐桌

...高免疫力”和口感好的新品种。 参考文献：《Genomics of the origin and evolution of Citrus》 Nature原文地址：https://www.nature.com/articles/nature25447 授权转载自cnbeta.com

文章 绘制类似于箱线图的散点图

...help' , 'h', 0, "logical","for help",'input1' , 'i', 1, "character","input the abuance of tax in each sample ,required",'input2' , 's', 1, "character","input the abuance of tax in each sample ,required",#'row' , 'r' , 1 , "character","row name,required",'name' , 'n', 1, "character","photo name"), by...

用户 45＆仰望

文章 基因家族分析--低成本SCI文章思路

... 参考文献： Zhao P, Wang D, Wang R, et al. Genome-wide analysis of the potatoHsp20gene family: identification, genomic organization and expression profiles in response to heat stress:[J]. Bmc Genomics, 2018, 19(1):61. 更多生物信息课程： 1. 文章越来越难发？是你没发现...

问题 老师我想问一下，MENA在analysis the network 报错的问题

This is your first time to run parameter calculations on soil20231205 at 0.890 threshold. It will take a few minutes...R project wrong! Please report web administrator.setwd("D:/wwwroot/MENA/datasets/196868ld/1701851366")library(sna)cor.data<-read.table("soil20231205 Pearson Correlation_0.890 4 R...

问题 根据课程基因组重测序的脚本，进行片段inner size，片段选择是否异常和测序深度与覆盖度统计均未能生成pdf文件，直接弹出如下对话框和如下命令

 Exception in thread "main" java.awt.AWTError: Can't connect to X11 window server using 'localhost:12.0' as the value of the DISPLAY variable.

文章 CRISPR基因编辑MC-3T3细胞系—骨相关研究的神器-源井生物

...ion of the Transcription Factor Rorb in Mice. Journal of Bone and Mineral Research, 33(4) 2018, 720–731. 注明 | 文章是源井生物原创，转载请注明。 关 注 供 纵 昊 “源井生物”，了解更多基因编辑相关资讯。

问题 SNP过滤问题

...滤SNP时有错误，查看输出日志发现After filtering, kept 200 out of 200 Individuals Outputting VCF file... After filtering, kept 0 out of a possible 26630017 Sites No data left for analysis! Run Time = 433.00 seconds。就没有了 。请问老师为啥会显示没有数据可控分析...

问题 GEO下载报错

...= reported length 7193437 2: In rbind(names(probs), probs_f) :   number of columns of result is not a multiple of vector length (arg 2) 对于报错内容，不是看的很明白，大神讲解下。主要想知道这样对后续的分析有什么影响。 下载的平台是 GPL6244[HuGene-1...

问题 NGS数据分析时，使用ANNOVAR的table_annovar.pl报错。

...out o -remove -protocol refGene -operation gx  -nastring . -csvoutNOTICE: the --polish argument is set ON automatically (use --nopolish to change this behavior)-----------------------------------------------------------------NOTICE: Processing operation=gx protocol=refGeneWARNING: the 'g' rather th...

问题 老师请问这个没有共线性结果是哪里出问题了

...e-05 # MAX GAPS: 25 ############### Statistics ############### # Number of collinear genes: 0, Percentage: 0.00 # Number of all genes: 55 ########################################## ST_AT.collinearity (END)

文章 R语言基础入门—数据框

...每个列应包含相同数量的数据项。 创建数据框 # Create the data frame.emp.data <- data.frame(   emp_id = c (1:5),    emp_name = c("Rick","Dan","Michelle","Ryan","Gary"),   salary = c(623.3,515.2,611.0,729.0,843.25),    start_date = as.Date(c("2012-01...

问题 vcftools过滤除了等位基因选项外，其他参数通通没用

...eles 2 |gzip - > all.clean.vcf.gz 结果是After filtering, kept 0 out of a possible 118111 Sites（中间很多Warning），于是把参数全部拆开一次只过滤一个参数，发现除了--min-alleles 2  --max-alleles 2，可以过滤成功：kept 106816 out of a possible 118111 Sites之...

问题 clustalw2多序列比对，序列输入不进去

...son (Fasta), GDE, Clustal, GCG/MSF,                  RSF.Enter the name of the sequence file :我输入了我的fasta格式的序列文件名,回车,出现:Sequence format is Pearson********************************************************************** CLUSTAL 2.1 Multiple Sequence Align...