使用get_gene_length_from_gtf.py这个脚本生成gene_length文件时,发生以下错误:
raceback (most recent call last): File "get_gene_length_from_gtf.py", line 50, in <module> kvs=get_value(tmp[8]) File "get_gene_length_from_gtf.py", line 37, in get_value k=g.group(...
MCScanX 安装问题:
make报错:
g++ struct.cc mcscan.cc read_data.cc out_utils.cc dagchainer.cc msa.cc permutation.cc -o MCScanXmsa.cc: In function ‘void msa_main(const char*)’:msa.cc:289:22: error: ‘chdir’ was not declared in this scope if (chdir(html_fn)<0) ...
for i in tail -n+2 $datafile/metadata_WRGB.txt|cut -f1 unmap;do
sed -r "s/>([^ ]*)/>${i}_\1/g" $workdir/5.pred_cluster/pred_result/${i}_full.fa > $workdir/5.pred_cluster/pred_result/${i}_renamed.fa
mv -f $workdir/5.pred_cluster/pred_result/${i}_renamed.fa $workdir/5.pred_cluster/pred_resul...