找到约 15 条结果

问题 R包安装

...n of this package for your version of R might be available elsewhere, see the ideas at https://cran.r-project.org/doc/manuals/r-patched/R-admin.html#Installing-packages    请问老师,出现这种情况应该怎么处理?

问题 UPARSE to pick OTUs in QIIME

 I have some confusion about the OTU picking methods "usearch"  and "usearch61" in QIIME (pick_otus.py command). Do they use the same algorithm as UCLUST in otu picking, exept the function of low abundance clusters filter and chimera detection in "usearch"  and "usearch61"?  And what is more, wh...

文章 鉴定组装植物病毒——系统详尽的植物病毒学!

.... . . . ................. . . . 12 RT-PCR and Real-Time RT-PCR Methods for the Detectionof Potato Virus Y in Potato Leaves and Tubers. . . ......................................................................  133 A New Method to Isolate Total dsRNA. . . . . . . ......................................

文章 windows10中基于WSL2的docker镜像存储位置更改

...this technology transition was lack of a setting screen to actually define the location (and other params), where the containers and downloaded images should be stored. As the space they occupy grows really fast and default is not always the best place for it! I don’t understand why, but because ...

文章 基因组注释分析方法

...ture-based and homology-based approaches was employed to identify TEs and other repeat regions. First, miniature inverted repeat transposable elements (MITEs) and long terminal repeat (LTR) elements were annotated by structure-based methods. The former was performed by MITE Hunter (11-2011)64, and t...

文章 tripal搭建基因组数据库网站

... 启动镜像运行网站: docker run --publish=80:80 --name=t4d8 -tid --volume=/web/t4d8:/var/www/drupal8/web/modules/contrib/tripal tripalproject/tripaldocker:latest 常见错误1The provided host name is not valid for this server.  解决办法见:https://tripal4.readthedocs.io/en/la...

问题 误: 无法分配大小为7.4 Mb的矢量 Killed after 9 m

...perm, apply, rowsum > # 读取输入的参数 > work_dir <- "/Volume/TCGA-LUAD/lab" > # 设置程序参数 > tcga_project <- "TCGA-LUAD" > data_category <- "DNA Methylation" > platform <- "Illumina Human Methylation 450" > sample_type <- "Primary solid Tu...

文章 人类癌症数据库突变注释

cosmic70: the latest COSMIC database with somatic mutations from cancer and the frequency of occurence in each subtype of cancer. For more updated cosmic, see instructions below on how to make them.icgc21: International Cancer Genome Consortium version 21 mutations.nci60: NCI-60 human tumor cell lin...

文章 edger_analysis.r 差异基因分析edgeR

...NA-Seq experiments with respect to biological variation.” Nucleic Acids Research, 40(10), 4288-4297. doi: 10.1093/nar/gks042.

文章 绘制全基因组甲基化图谱

...nput", type="character",required=T,                help="input smoothed data result  file[required]",                metavar="filepath")parser$add_argument( "-p", "--pallete", type="character",nargs='+',required=F,default=c("#eb65a0", "#22c2e4", "#4abb6b","#f28d21"),          ...

问题 circos 分析

... Could not parse value for configuration parameter [max] in block [plot]. The  location in the configuration is shown above.  If you are having trouble debugging this error, first read the best practices  tutorial for helpful tips that address many common problems      http://www.circos.ca/d...

问题 Failed to load R0 module F:\/VMMR0.r0: The path is not clean of leading double slashes: 'F:\/VMMR0.r0' (VERR_SUPLIB_PATH_NOT_CLEAN). 代码: E_FAIL (0x80004005) 组件: ConsoleWrap 界面: IConsole {872da645-4a9b-1727-bee2-5585105b9eed}

不能为虚拟电脑bio—Linux—8.0.7打开一个新任务

文章 sankey_plot.r绘制桑基图

...p message and exit -i input, --input input input the matrix [required] -g group [group ...], --group group [group ...] input column names of three groups [required] -c color, --color color column to fill color [required] ...

文章 evolview 3.0最新更新美化进化树

...alization, annotation, and management of phylogenetic trees, Nucleic Acids Research,(2019) (https://academic.oup.com/nar/advance-article/doi/10.1093/nar/gkz357/5494715) 1.新建上传自己的tree文件: Upload tree control iconProject name text boxTree name text boxSelect demo tree (for load tr...

文章 heatmap_group_plot.r 分组热图展示免疫侵润结果

...t  -i filepath, --input filepath                        input the immune res data,[required]  -m filepath, --metadata filepath                        input metadata file path[required]  -g group [group ...], --group group [group ...]                        inpu...