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问题 使用tcga_gene_exp_download.r下载TCGA数据始终无法产生gene expression相关的文件 killed

...loading chunk 1 of 59 (10 files, size = 600.677 KB) as Sun_Oct_17_23_40_26_2021_0.tar.gz Downloading: 42 kB     Downloading chunk 2 of 59 (10 files, size = 414.242 KB) as Sun_Oct_17_23_40_26_2021_1.tar.gz Downloading: 34 kB     Downloading chunk 3 of 59 (10 files, size = 465.859 KB) as Sun_O...

文章 环境微生物领域杂志影响因子

...12.441Nature Communications12.353TRENDS IN MICROBIOLOGY11.776NUCLEIC ACIDS RESEARCH11.561Science Advances11.511Nature Plants11.471FEMS MICROBIOLOGY REVIEWS11.392Annual Review of Microbiology9.808ISME Journal9.520National Science Review9.408PLOS BIOLOGY9.163Microbiome9.133Cell Systems8.982Nature Revi...

文章 SCI文章投稿各阶段的电子邮件模板合集

...to declare on behalf of my co-authors that the work described was original research that has not been published previously, and not under consideration for publication elsewhere, in whole or in part. All the authors listed have approved the manuscript that is enclosed. In this work, we evaluated ...

文章 ppi_network.r 蛋白互作网络分析

... functional discovery in genome-wide experimental datasets, Nucleic Acids Research, Volume 47, Issue D1, 08 January 2019, Pages D607–D613, https://doi.org/10.1093/nar/gky1131

文章 2018年最新SCI影响因子及中科院分区统计

...快,2-4周http://www.springer.com/series/5584 10Advances in Botanical ResearchADV BOT RES1.3881.1914区生物植物科学SCI/SCIE较易>12周,或约稿http://www.springer.com/series/10 11AGRICULTURAL AND FOREST METEOROLOGYAGR FOREST METEOROL4.0393.8871区农林科学农艺学SCI约50%...

文章 TCGA癌症数据库挖掘发表的大文章CNS级别汇总2019

TCGA Research Network Publications A comprehensive list of publications by The Cancer Genome Atlas program. This list is updated as the TCGA Analysis Network continues to study and mine the data. Cancers Selected for Study lists original marker publications by cancer type. Supplemental and ...

文章 单拷贝直系同源基因构建系统发育树以及分歧时间

...ocellulose Degradation. PLOS ONE 11(8): e0160336. https://doi.org/10.1371/journal.pone.0160336

文章 遗传进化英文方法参考

...Reduce framework for analyzing next-generation DNA sequencing data. Genome research. 2010; 20(9):1297–303. doi: 10.1101/gr.107524.110 PMID: 20644199 [4] Felsenstein, J. PHYLIP-phylogeny inference package (version 3.2). Cladistics 5,164–166 (1989). [5] Jaime Huerta-Cepas, François Serra and Pe...

文章 亚型划分比较波浪图(桑基图)绘制

...我们有时会看到她的身影。 比如在一篇2021年发表于The Journal for ImmunoTherapy of Cancer上的影响因子为13.75的文献《m6A modification patterns and tumor immune landscape in clear cell renal carcinoma》中,作者利用桑基图来描绘m6A簇、免疫亚型和m6A score...

文章 IF=8.78|非肿瘤数据挖掘思路(GWAS Catalog)

...取挖掘。GWAS Catalog数据库简介:由美国National Human Genome Research Institute (NHGRI) 和欧洲的 European Bioinformatics Institute (EMBL-EBI) 为了便于研究者快速高效地获取当前的GWAS结果,共同开发和制作的NHGRI GWAS Catalog公共资源。https://www.ebi.ac.uk...

文章 群体遗传进化与GWAS分析动植物文献

...ght resistance via a genome-wide association study[J]. Plant Biotechnology Journal.2021.单倍型( haplotype )是共存于单条染色体上的一系列遗传变异位点的组合,其在染色体上形成的连续的、稳定的、几乎不被重组所打断的单倍型区域,称为单倍型块(...

文章 MA plot 绘图计算公式

...tematic biases in dye coupling and hybridization efficiencies, as well as other technical biases in the DNA probes and the print tip used to spot the array.[3] By minimizing these systematic variations, true biological differences can be found. To determine whether normalization is needed, one can ...

文章 生信挖掘GEO+TCGA 文献速览

...:9033342. doi: 10.1155/2022/9033342. PMID: 36238643; PMCID: PMC9553395. 2021年7月发表在《Frontiers in Immunology》上的一篇7.5分的文章,题目为“Exploration of the Shared Gene Signatures and Molecular Mechanisms Between Systemic Lupus Erythematosus and Pulmonary Arterial Hyperte...

问题 gwas分析群体画进化树

...smu.top/treedata-book/ If you use the ggtree package suite in published research, please cite the appropriate paper(s): Guangchuang Yu, David Smith, Huachen Zhu, Yi Guan, Tommy Tsan-Yuk Lam. ggtree: an R package for visualization and annotation of phylogenetic trees with their covariates an...

文章 TCGA临床数据各列含义

TCGA 临床数据各列解释:  Property name Description kind The resource type. aliquots[] List of barcodes of aliquots taken from this participant. clinical_data The clinical data about the participant. ParticipantBarcode Participant barcode. Project Project name, .eg. “TCG...