...Sequence Patterns
2.UNOISE2: improved error-correction for Illumina 16S and ITS amplicon sequencing
3.DADA2: High-resolution sample inference from Illumina amplicon data
此外,我们在网易云课堂上有各种教学视频,有兴趣可以了解一下:
1.docker 生物信息工具安装...
for species in Anser_brachyrhynchus Equus_caballus Homo_sapiens Mus_musculus Oryctolagus_cuniculus Ovis_aries_rambouillet Sus_scrofa.Sscrofa;do
genome=$datadir/$species.genome.fa.gz
gff=$datadir/$species.gff.gz
#保留蛋白编码基因
agat_sp_filter_feature_by_attribute_value...
...ch、International Journal of Biological Macromolecules、Industrial Crops and Products 上不乏该类文章。
目前来看,基因家族分析加qPCR+亚细胞定位实验基本就可以发到二区期刊,如果有更多的功能验证实验比如转基因等,那就可以冲一区...
...ion map provides insights into the genetic basis of cucumber domestication and diversity”,在这个文章中,作者对来自印度、西双版纳、欧洲和东亚四个地方的黄瓜进行了种群分化的研究,同时通过遗传多样性和选择性清除定位了与驯化密切相关...
文献链接:Population-genomic analyses reveal bottlenecks and asymmetric introgression from Persian into iron walnut during domestication | Genome Biology | Full Text (biomedcentral.com)
数据可用性:The entire genome resequencing data have been deposited at GenBank under the accession PRJ...