...tmp*, value = contr.funs[1 + isOF[nn]]) :
contrasts can be applied only to factors with 2 or more levels
Calls: aov ... model.matrix.terms -> model.matrix.default -> contrasts<-
Execution halted。我在泛基因组分类的时候只分为了3类，core, dispensable和private。是这个...
...，我基因家族分析的文章被审稿人问道：It is not clear to me why authors search protein from the genome, not proteome. Moreover, the authors should underline that their results report the finding of candidate genes encoding protein and not candidate p...
... trees from user guide tree examples)Select tree input format.Tree text editor: Paste the tree contents here. or use demo tree option to load trees from user guide examples.2. 基础设置：
上传完成之后，可以点edit，做一些进化树的基础设置，和2.0差不多：
3 高级...
... tumor_rep3_gene.tsv -l tumor_rep3
Traceback (most recent call last):
File "/mnt/data/home/tycloud/RNAseq/scripts/merge_gene_count.py", line 12, in <module>
import pandas as pd
ModuleNotFoundError: No module named 'pandas'
..._species,shannon,chao1,simpson,ace,goods_coverage
在运行时报错
File "/share/work/biosoft/python/Python-v2.7.11/lib/python2.7/site-packages/scikit_bio-0.2.3-py2.7-linux-x86_64.egg/skbio/diversity/alpha/_ace.py", line 70, in ace
raise ValueError("The only rare OTUs are singletons, so t...