...t_taxid_uniref.pl division.dmp nodes.dmp uniref90.fasta.gz ./
for i in PLN MAM INV PHG PRI ROD SYN UNA VRL VRT ENV BCT ;do
diamond makedb --in ${i}_uniref90.fa -d ${i}_uniref90.fa
done
...mloptional arguments: -h, --help show this help message and exit -i count, --count count input read count file , csv or tsv format[ optional] --sep sep the field separator character for count file; Values ...
...access to an unmodified copy of data that was previously stored in CGHub andin the TCGA Data Portal hosted by the TCGA Data Coordinating Center (DCC), in which uses as references GRCh37 (hg19) and GRCh36 (hg18).
GDC harmonized database: data available was harmonized against GRCh38 (hg38) using G...
...格，后续的分析就很好展开了。
参考文献：[1] T. Magoc and S. Salzberg. FLASH: Fast length adjustment of short reads to improve genome assemblies. Bioinformatics 27:21 (2011), 2957-63.[2] Patrick D. Schloss,et al. Introducing mothur: Open-Source, Platform-Independent, Community-...
...表我的分组信息这些都是准确的
这个代码不报错
for i in {2..6};do Rscript $scriptdir/meta_stat.r -i ../05.export_data/taxa_summary/absolute_abundance/feature_table_tax_L$i.txt \ -m $metadata -t Group \ -a WSD_Lig_PPI -b WSD_PPI \ -o meta_stat --name WSD_Ligatu...
阿尔兹海默症病毒组——A metagenomic study of gut viral markers in amyloid-positive Alzheimer's disease patients
推荐语：越来越多的证据表明，病毒参与了阿尔茨海默症（AD）的发展和治疗。然而，对AD患者肠道病毒组的研究仍然存在显著的研...