找到约 15 条结果

问题 安捷伦双色通道 “RawData=read.maimages(files=files,source="genepix") “报错”

老师您好！ 我购买了付费课程，开头就报错了。Error in readGPRHeader(fullname) :    File is not in Axon Text File (ATF) format。请帮忙解决下 谢谢

文章 基因entrez ID转换 Gene Symbol 名字 R语言

setwd("/share/nas1/huangls/test/hypertension")library(org.Hs.eg.db)library(annotate)df=read.table("GPL19109.soft.1",header = T,sep = "\t",stringsAsFactors = F)df=df[!is.na(df$ENTREZ_GENE_ID),]name=getSYMBOL(as.character(df$ENTREZ_GENE_ID), data="org.Hs.eg.db")df$`Gene Symbol`=namehead(df)

问题 docker拉取不了镜像了？怎么回事

...ull omicsclass/samtools:latest Error response from daemon: Get https://registry-1.docker.io/v2/omicsclass/samtools/manifests/latest: Get https://auth.docker.io/token?account=erdongzhengwen&scope=repository%3Aomicsclass%2Fsamtools%3Apull&service=registry.docker.io: dial tcp [2600:1f18:2148:b...

文章 空间转录组数据读取

...red if (filter_matrix) { tissue_positions = tissue_positions[which(x = tissue_positions$tissue == 1), , drop = FALSE] } # Calculate spot radius unnormalized_radius = scale_factors$fiducial_diameter_fullres * scale_factors$tissue_hires_scalef spot_radius = ...

文章 很大的压缩文件计算行数

...& chunk, int chunk_size) { unsigned long long local_count = 0; for (int i = 0; i < chunk_size; ++i) { if (chunk[i] == '\n') { ++local_count; } } line_count += local_count; } int main(int argc, char* argv[]) { if (argc != 2) { std::cerr ...

文章 NCBI下载的10X单细胞数据只有read1和read2如何读入cellranger

...ault=os.getcwd(),                       help='Output directory for linked files (default: current directory)')    parser.add_argument('-t', '--table', required=True,                       help='Tab-delimited table with Run and Library_Name columns')    parser.add_argument...

文章 1000G千人基因组计划人群缩写对照表

...nSAS, South Asian 数据来源：http://www.internationalgenome.org/faq/which-populations-are-part-your-study/

问题 进行bam文件排序时报错 killed

显示：level=error msg="error waiting for container

问题 基因组注释解压 database.tar.gz.* 问题

...rc error database/eggNOG/latest tar: Child returned status 1 tar: Error is not recoverable: exiting now 我的做法是 cat database.tar.gz.* > database.tar.gz， tar zxvf database.tar.gz，后面我去掉 -z 参数，依然报该错误，而且服务器中是已经安装了 gzip 包的，...

问题 单细胞测序FindAllmarkers

...are()`: ! Must group by variables found in `.data`. • Column `cluster` is not found. Backtrace:     ▆  1. ├─obj.markers %>% group_by(cluster) %>% ...  2. ├─dplyr::top_n(., n = opt$top_n, wt = avg_log2FC)  3. │ └─dplyr::filter(...)  4. ├─dplyr::group_by(., cl...

问题 用deseq_analysis.r分析差异表达分析时报如下的错误

[1] "abstract_factors is start" Error in scan(file = file, what = what, sep = sep, quote = quote, dec = dec,  :   line 2 did not have 3 elements Calls: abstract_factors -> read.table -> scan Execution halted

问题 构建进化树报错

构建进化树时报错：Oops! MEGA has encountered an error and cannot continue with this analysis:Some pairwise distances could not be estimated. For example, between sequences 25 and 12.这是为什么啊？

问题 MCScanX下游分析出错

安装的时候，一切都很顺利，然后MCScanX对at的共线性分析也很顺利，但是在下游分析family_circle_plotter，报错了。再次回到MCScanX下去make的时候，不成功，报错为：Nothing to be done for 'default'.

文章 i遗传进化

...ecode --recode-INFO-all \     --stdout |gzip - > nomissing.vcf.gz for i in Chr1 Chr2 Chr3 Chr4 Chr5 Chr6 Chr7;do vcftools --gzvcf nomissing.vcf.gz --chr $i  \     --recode --recode-INFO-all \     --stdout |gzip - > nomissing.$i.vcf.gz vcftools --gzvcf nomissing.$i.vcf.gz --p...

问题 docker运行qiime2报错

time="2024-06-12T16:03:27+08:00" level=error msg="error waiting for container: unexpected EOF" 这是什么造成的呢