找到约 15 条结果

文章 蛋白质的理化性质除了用Expasy网站还能用TBtools等分析

... 相对分子质量 (KDa)、等电点(PI)、负电荷残基(Total number of negatively charged residues)、正电荷残基(Total number of positively charged residues)、不稳定系数(Instability index)、总平均亲水性(Grand average of hydropathicity-简写GRAVY)、脂肪指数(Alipha...

文章 你不知道的微生物互作分析方法

... 参考文献: [1] Durrer A, Gumiere T, Taketani R G, et al. The drivers underlying biogeographical patterns of bacterial communities in soils under sugarcane cultivation[J]. Applied Soil Ecology, 2016, 110. [2] Faust K, Sathirapongsasuti J F, Izard J, et al. Microbial Co-occurrenc...

问题 做有参转录组分析,在进行基因表达定量的时候,出现如下问题,请问老师这是什么原因呀

...Feature Yangtao2000001 does not contain a 'gene_id' attribute  [Exception type: ValueError, raised in count.py:53]

问题 基因家族分析时用大豆gff文件报错 killed

...想要进行“保留蛋白编码基因”出现报错“=> Version of the Bioperl GFF parser selected by AGAT: 3 gff3 reader error level1: No ID attribute found @ for the feature: 1    ena_assembly_gap        biological_region      2584646                               ...

问题 Error in seq.default(grps[start] + 1, grps[start + 1] - 1) : 'from' must be of length 1此外: Warning messages: 1: In file(con, "r") : InternetOpenUrl失败:’不能连接到吊销服务器,或者未能获得最终响应。' 2: In readLines(...) : 读'http://bioconductor.org/config.yaml'时最后一行未遂

在rstudio中运行 BiocManager::install("TCGAbiolinks"),迟迟无法下载数据,并显示上方错误,请问怎么解决

问题 单倍型分析中最后一步失败,麻烦老师

...vironment value of R_HOME --> Q&A for bioinformatics, please visit the website: https://www.omicsclass.com/ --> R beginners ? I suggest your  learning  R language: https://study.omicsclass.com/index Error in library(geneHapR) : there is no package called ‘geneHapR’ Execution halt...

问题 安装 velocyto 报错

...    [end of output]   note: This error originates from a subprocess, and is likely not a problem with pip. error: subprocess-exited-with-error × Getting requirements to build editable did not run successfully. │ exit code: 1 ╰─> See above for output. note: This error origina...

文章 食管癌相关文章ESCC

...管鳞癌新辅助治疗耐受机制 发表期刊:Signal Transduction and Targeted Therapy(2023,39.3) 立题背景:食管癌位居全球癌症死因第六位,全球超过一半的食管癌患者在中国,且多以鳞癌为主。食管癌预后较差,患者就诊时多属疾病中...

问题 16S课程 02.feature_table #16S 分析 deblur

... Artifact but are missing the plugin(s) necessary to load it. Artifact has type 'SampleData[JoinedSequencesWithQuality]' and format 'SingleLanePerSampleSingleEndFastqDirFmt' See above for debug info.

文章 施一公:如何提高英文的科研写作能力

...过来找我,拿了一叠纸, “This is the draft. Please let me know what you think. We can aim for a Science report.”(这是初稿,你看看如何,我们可以试试《科学》)我仔细一看,天啊!一共7页,四个多小时Jeremy已经把文章的整体写完了,只是...

问题 运行go_enrich.r报错

...vironment value of R_HOME --> Q&A for bioinformatics, please visit the website: https://www.omicsclass.com/ --> R beginners ? I suggest your  learning  R language: https://study.omicsclass.com/index Failed to create bus connection: No such file or directory Error: package ‘Annotati...

问题 用W11安装docker后,docker search omicsclass出错

...dial tcp 108.160.172.1:443: connectex: A connection attempt failed because the connected party did not properly respond after a period of time, or established connection failed because connected host has failed to respond.

文章 kraken2生成的biom文件处理

...tput biom file', required=True) args = parser.parse_args() # Load the BIOM table table = load_table(args.input) # Get the OTU IDs and the data otu_ids = table.ids(axis='observation') data = table.matrix_data # Get the taxonomy metadata metadata = table.metadata(axi...

问题 老师,您好!我在用-SortGenotypeFilePlugin排序vcf文件时,得出来的文件比原始文件小很多。

...Pos:40436InsertionPos:0Name:SHIC_SCAFFOLD_11_40436Variants:G/AMAF:NaNRef:G and PositionChr:HIC_SCAFFOLD_9Pos:117578893InsertionPos:0Name:SHIC_SCAFFOLD_9_117578893Variants:G/AMAF:NaNRef:G out of order.

文章 vcf格式文件基础知识与编辑操作详解

...eference=1000GenomesPilot-NCBI36##phasing=partial##INFO=<ID=NS,Number=1,Type=Integer,Description="Number of Samples With Data">##INFO=<ID=DP,Number=1,Type=Integer,Description="Total Depth">##INFO=<ID=AF,Number=.,Type=Float,Description="Allele Frequency">##INFO=<ID=AA,Number=1,Ty...