文章 AI助手帮我整理GEO数据库中样本信息表格

...brary Name tissue tissue_type time_point SRR17839305 GSM5851572 Tumor Head And Neck Oral Cavity Squamous Cell Carcinoma post SRR17839306 GSM5851571 Tumor Head And Neck Oral Cavity Squamous Cell Carcinoma pre SRR17839307 GSM5851570 Tumor Head And Neck Oral Cavity Squamous Cell Carcinoma post SRR17839...

文章 8.28接收-毛竹bHLH基因家族分析文章解读及原文献下载

...竹中bHLH家族基因分布在其中16个亚家族中(except 1,7, 13, 14, and 20)。 水稻167个和毛竹中鉴定到的137 个bHLH家族基因，构建系统发育树；如下图所示，以上基因共划分为21 subfamilies，其中毛竹中bHLH家族基因分布在其中16个亚家族中(excep...

文章 R 安装包：configure: error: proj_api.h not found in standard or given locations.

hecking for strings.h... yeschecking for sys/stat.h... yeschecking for sys/types.h... yeschecking for unistd.h... yeschecking for gdal.h... yeschecking GDAL: linking with --libs only... yeschecking GDAL: /usr/share/gdal/pcs.csv readable... nochecking GDAL: checking whether PROJ is available for link...

问题 基因家族鉴定

...好，请问： The predicted genes were then manually checked using NCBI and UniPort online BLASTP, with threshold of E-value < 10-25. Identified genes were validated by aligning to a nonredundant gene dataset. Identified genes were also validated by BLAST searching against an EST database wit...

问题 老师，请教一下，重测序时对bam文件排序出现问题，提示Exception in thread "main" java.lang.RuntimeException: Invalid lookback distance found.怎么解决呀

问题 安装docker toolbox 报错：Looks like something went wrong in step ´Looking for vboxmanage.exe´… Press any key to continue…

win10家庭版，CPU虚拟化已经开启。

问题 使用GATK的GenomicsDBImport合并gvcf导入db时报错Unexpected compressed block length: 1 for /work/GATK/BN14.g.vcf.gz

...oolkit (GATK) v4.4.0.0 10:53:02.160 INFO  GenomicsDBImport - For support and documentation go to https://software.broadinstitute.org/gatk/ 10:53:02.160 INFO  GenomicsDBImport - Executing as root@1fea4655ae23 on Linux v5.14.0-284.11.1.el9_2.x86_64 amd64 10:53:02.160 INFO  GenomicsDBImport - Jav...

文章 univariate_cox_batch.r 基因表达量批量单因素cox回归分析

...onoptional arguments:  -h, --help            show this help message and exit  -m metadata, --metadata metadata                        input metadata file path with suvival time [required]  -g expset, --expset expset                        input gene expression set fi...

文章 perl测试代码语法高亮

标量字符串 "omicsclass""daf2325""244626" 'omicsgene' 反斜杠 print "A quote \" in a string \n";   #取消双引号 " print 'A quote \' in a string \n';  #取消单引号 '   print "A quote \\ in a string \n";  #取消反斜杠\  

文章 barplot()R语言绘制状图

...101467081Amino Acid Metabolism0.0990784610.1023070980.098133001Replication and Repair0.0640276080.081496790.077107142Energy Metabolism0.0630605790.0669996830.055660175Translation0.0486662250.0525558320.048639947Poorly Characterized0.0501483020.0474659650.049391479Metabolism of Cofactors and Vitamins...

问题 jcvi报错'LayoutLine' object has no attribute 'sizes'

我的layout文件种没有空行，先报错‘LayoutLine' object has no attribute 'color',我将layout文件edges下的e顶格写后变成了这个报错，请问老师应该怎么解决 Traceback (most recent call last):   File "/share/work/biosoft/python/Python3/lib/python3.9/runpy.py", line ...

文章 edger_analysis.r 差异基因分析edgeR

...e/1506 optional arguments: -h, --help show this help message and exit -i filepath, --input filepath input read count file [required] -m filepath, --metadata filepath metadata file , required -t treatname, --treatname treatname ...

文章 tsne_analysis.r 表达聚类分析

...e/1498 optional arguments: -h, --help show this help message and exit -i filepath, --input filepath input the dataset martix [required] -m metadata, --metadata metadata input metadata file path[required] -d dims, --dims dims set Ou...

文章 muscle新版，旧版使用的一些差别

...使用存在一些差别： 1.旧版:以muscle V3.8.31为例，muscle  -in <inputfile> -out <outputfile> -in 后加输入文件，-out 后接输出文件 -in 后加输入文件，-out 后接输出文件 即：muscle  -in in.fa -out  out.fa 2.新版以muscle 5.1版为例：m...

问题 做PCA分析时报错

Error in `geom_point()`: ! Problem while computing aesthetics. ℹ Error occurred in the 1st layer. Caused by error in `get()`: ! object 'stagestage' not found 做PCA分析时报错