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文章 利用SNP构建指纹图谱!SNPT的使用教程!

...-bin/snpt这个软件可以做的分析: Indentify unique SNPs profiles and assign sequence types(MST);Calculate allele frequencies;Find informative SNPs;Calculate D (Index of the Discrininatory Ability);Find the set(s) of minimum SNPs;Output MST data file in mega and interleaved mega format. ...

文章 利用qiime2对微生物扩增子测序数据文库根据barcode信息拆分数据

...emux.qza  参考:https://forum.qiime2.org/t/demultiplexing-and-trimming-adapters-from-reads-with-q2-cutadapt/2313 课程推荐:微生物扩增子分析课程实操     微生物16S/ITS/18S分析原理及结果解读

文章 熊猫全基因组研究进展

...: [1].   Li R, Fan W, Tian G, Zhu H, He L, Cai J, et al. The sequence and de novo assembly of the giant panda genome[J]. Nature. 2009;463:311. [2].   Hu Y, Wu Q, Ma S, Ma T, Shan L, Wang X, et al. Comparative genomics reveals convergent evolution between the bamboo-eating giant and red panda...

问题 meme分析后显示error at: maxw

...name of background Markov model file[-revcomp]allow sites on + or - DNA strands[-pal]force palindromes (requires -dna)[-maxiter <maxiter>]maximum EM iterations to run[-distance <distance>]EM convergence criterion[-psp <pspfile>]name of positional priors file[-prior dirichlet|dmix|m...

问题 同学,你这个问题解决了吗

...soft/MCScanX/MCScanX/MCScanX ST_AT 得到以下结果 Reading BLAST file and pre-processingGenerating BLAST list170 matches imported (1 discarded)44 pairwise comparisons0 alignments generatedPairwise collinear blocks written to ST_AT.collinearity [0.013 seconds elapsed]Writing multiple syntenic bl...

文章 小麦TCP基因家族分析文献解读及原文献下载

...家族分析原文献下载(点此链接):Genome-Wide Identification and Expression Profiling of the TCP Family Genes in Spike and Grain Development of Wheat (Triticum aestivum L.).pdf 小麦TCP基因家族分析文献解读 日常科研中你我经会常遇到看不懂的图表,不会挖...

问题 conet构建网络图参数设置

...法部分有提到“Pairwise correlations were determined using Pearson and Spearman correlations as described previously. Only relatively large correlation coefficients (ρ > 0.8 and p<0.01) detected with both methods (Pearson and Spearman) were included into network analyses to minimize fal...

文章 perl中读取和写出Excel的包,xls,和xlsx

...); # Add a worksheet $worksheet = $workbook->add_worksheet(); #  Add and define a format $format = $workbook->add_format(); # Add a format$format->set_bold();$format->set_color('red');$format->set_align('center'); # Write a formatted and unformatted string, row and column notation...

问题 Agilent单色背景校正,Error in if (alpha

...ted Array 2 corrected Array 3 corrected Array 4 corrected Array 5Error in if (alpha <= 0) stop("alpha must be positive") :    missing value where TRUE/FALSE needed In addition: Warning message: In log(out$alpha) : NaNs produced

问题 GWAS分析中提示Error in hclust(d, method = method) : NA/NaN/Inf in foreign function call (arg 11) Calls: pheatmap -> cluster_mat -> hclust Execution halted

Error in hclust(d, method = method) :   NA/NaN/Inf in foreign function call (arg 11) Calls: pheatmap -> cluster_mat -> hclust Execution halted

问题 老师好,我在使用SNP2CAPS软件时输入文件后显示Loaded data of 0 marker(s) and sequence(s). 显示没有加载到标记和序列,求解是什么问题呢

问题 Error correction and assembling warnings: * 0:12:28.935 6768M / 13G WARN General (kmer_coverage_model.cpp : 327) Valley value was estimated improperly, reset to 16

问题 circos 分析

...RCOS ERROR ***      cwd: /work/cm01_reseq_demo/8.circos      command: /biosoft/miniconda/envs/reseq/bin/circos -conf      /work/cm01_reseq_demo/8.circos/circos.conf -outputdir      /work/cm01_reseq_demo/8.circos -outputfile circos  CONFIGURATION FILE ERROR  Could not parse valu...

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