找到约 15 条结果

文章 基于R实现统计中的检验方法---T检验

...  sites  t = -0.93574, df = 9, p-value = 0.3738alternative hypothesis: true mean is not equal to 4.595 percent confidence interval: 4.230016 4.611984sample estimates:mean of x     4.421 p=0.3738>0.05,认为所抽样水体的含氧量与多年平均值无显著差...

问题 Failed to load R0 module F:\/VMMR0.r0: The path is not clean of leading double slashes: 'F:\/VMMR0.r0' (VERR_SUPLIB_PATH_NOT_CLEAN). 代码: E_FAIL (0x80004005) 组件: ConsoleWrap 界面: IConsole {872da645-4a9b-1727-bee2-5585105b9eed}

不能为虚拟电脑bio—Linux—8.0.7打开一个新任务

文章 cBioPortal数据库使用教程

... 使用cBioPortal数据库可以先阅读关于该数据库的文章: The cBio cancer genomics portal: an open platform for exploring multidimensional cancer genomics data.Integrative analysis of complex cancer genomics and clinical profiles using the cBioPortal. 大规模的癌症基因组计...

文章 TCGA数据库中应该下载哪种表达量数据HTSeq-Counts,HTSeq-FPKM,HTSeq-FPKM-UQ

...文件有3种类型,分别对应着不同的定量方法。 FPKM The Fragments per Kilobase of transcript per Million mapped reads (FPKM) calculation normalizes read count by dividing it by the gene length and the total number of reads mapped to protein-coding genes. Upper Quartile FPKM Th...

文章 TCGA数据库中癌症最新缩写中英文对照表获取方法 Project号 与癌种之间对应关系

...CC Adrenocortical carcinoma 肾上腺皮质癌 TCGA-BLCA Bladder Urothelial Carcinoma 膀胱尿路上皮癌 TCGA-LGG Brain Lower Grade Glioma 脑低级脑胶质瘤 TCGA-BRCA Breast invasive carcinoma 乳腺浸润癌 TCGA-CESC Cervical squamous cell carcinoma and endocervical ad...

文章 clinvar数据库人类疾病数据库ANNOVAR数据库使用

...息CLNALLELEID, CLNDN, CLNDISDB, CLNREVSTAT, CLNSIG: ALLELEID ="the ClinVar Allele ID" CLNDN ="ClinVar's preferred disease name for the concept specified by disease identifiers in CLNDISDB"CLNDNINCL ="For included Variant : ClinVar's preferred disease name for the concept specified by dis...

文章 GATK报错:Could not find walker with name: VariantFiltration

... your command are incorrect. ##### ERROR The error message below tells you what is the problem. ##### ERROR ##### ERROR If the problem is an invalid argument, please check the online documentation guide ##### ERROR (or rerun your command with --help) to view allowable command-line arguments for this...

文章 rgb函数选择颜色(并控制深浅)

...tors with values in [0, M] where M is maxColorValue. When this is255, the red, blue, green, and alpha values are coerced to integers in0:255 and the result is computed most efficiently.namescharacter vector. The names for the resulting vector.maxColorValuenumber giving the maximum of the ...

问题 使用FUSION进行TWAS分析权重训练问题

再使用自己的数据进行权重训练的时候,当使用加入blup模型运行GEUV.compute_weights.sh脚本时报错,去除该模型可以正常运行时怎么回事?需要如何解决?

文章 Nature Medicine同期8篇论文,聚焦人工智能在医学领域的应用

...BioWorld列举并介绍了这8篇论文: 1 High-performance medicine: the convergence of human and artificial intelligence 高效医学:人类与智能的融合 作者:Eric J. Topol;单位:Scripps研究所 通过在所有部门中使用标记的大数据以及显著增强的计算...

问题 Bioconductor包安装时出现警告,导致最后出来的图片部分缺失

...or.org/packages/3.2/bioc/src/contrib/AnnotationDbi_1.32.3.tar.gz' Content type 'application/x-gzip' length 4268480 bytes (4.1 MB) ================================================== downloaded 4.1 MB trying URL 'https://bioconductor.org/packages/3.2/bioc/src/contrib/annotate_1.48.0.tar.gz' Con...

文章 胃癌免疫侵润预后Signature数据挖掘-4.8分SCI思路解析

...Xena 网站下载得到用于预测模型构建;GEO数据库中 GSE62254 and GSE29274数据集用于模型验证。免疫侵润分析方法:ESTIMATE (R包)和 CIBERSORT (在线工具),ssGSEA(GSVA)。 预后signature查找: 免疫评分聚类区分免疫亚型 根据ssGSEA 评估...

文章 GATK|Timeout of 30000 milliseconds was reached while trying to acquire a lock on file raw.vcf.tmp.idx.

...是空的。 然后再在命令行中添加-disable_auto_index_creation_and_locking_when_reading_rods 这个参数。并运行命令行

文章 Orthology 定义

...or example, when reconstructing a phylogeny from amino acid sequences that the proteins be homologous. [. . . ] there should be two subclasses of homology. Where the homology is the result of gene duplication so that both copies have descended side by side during the history of an organism (for exam...

问题 下载甲基化数据时找不到样本类型,

...        platform = platform,+                       sample.type = sample_type)--------------------------------------o GDCquery: Searching in GDC database--------------------------------------Genome of reference: hg38|tissue.code |shortLetterCode |tissue.definition             ...