... are annotated with the GO-term.Significant : number of genes belonging toyour input which are annotated with the GO-term.Expected : show an estimate of the number of genes a node of size Annotated would have if the significant genes were to be randomly selected from the gene universe.
...版本支持组件base-directories1.0-37Essential Bio-Linux configuration files.生物信息平台重要配置文件big-blast1.0.3-4The big-blast script for annotation of long sequences注释长序列的big-blast脚本biocode2.3.3-2Biocode plugin for Geneious workbenchGeneious workbech的Biocode插...
...rhttp://www.drive5.com/muscleThis software is donated to the public domain.Please cite: Edgar, R.C. Nucleic Acids Res 32(5), 1792-97.1 2 seqs, max length 19, avg length 1500:00:00 11 MB(-1%) Iter 1 100.00% K-mer dist pass 100:00:00 11 MB(-1%) Iter 1 100.00% K-mer di...
z-Transform
Sometimes one has the problem tomake two samples comparable, i.e. to compare measured values of a sample with respect to their (relative) position in the distribution. An often used aid is the z-transform which converts the values of a sample into z-scores:
with
zi ... z-transfo...
...i count, --count count input read count file , csv or tsv format[ optional] --sep sep the field separator character for count file; Values on each line of thefile are separated by this ...
...tion
Error: package or namespace load failed for ‘igraph’ in dyn.load(file, DLLpath = DLLpath, ...):
unable to load shared object '/share/biosoft/R/R-v4.2.2/lib64/R/library/00LOCK-igraph/00new/igraph/libs/igraph.so':
libglpk.so.36: cannot open shared object file: No such file or director...
...v -p S10_vs_J10.deg_gene_heatmap -o ./
--> Q&A for bioinformatics, please visit the website: https://www.omicsclass.com/
--> R beginners ? I suggest your learning R language: https://study.omicsclass.com/index
Error in hclust(d, method = method) :
NA/NaN/Inf in foreign function...
...p://www.drive5.com/muscle
This software is donated to the public domain.
Please cite: Edgar, R.C. Nucleic Acids Res 32(5), 1792-97.
1 2 seqs, max length 19, avg length 15
00:00:00 11 MB(-1%) Iter 1 100.00% K-mer dist pass 1
00:00:00 11 MB(-1%) Iter 1 100.00% K-mer ...
....onLoad failed in loadNamespace() for 'rJava', details:
call: dyn.load(file, DLLpath = DLLpath, ...)
error: unable to load shared object '/share/work/biosoft/R/R-v4.2.0/lib64/R/library/rJava/libs/rJava.so':
libjvm.so: cannot open shared object file: No such file or directory
Execution h...