cosmic70: the latest COSMIC database with somatic mutations from cancer and the frequency of occurence in each subtype of cancer. For more updated cosmic, see instructions below on how to make them.icgc21: International Cancer Genome Consortium version 21 mutations.nci60: NCI-60 human tumor cell lin...
...rixStats 1.2 that released a couple of days ago. Can you downgrade to 1.1 and try?remotes::install_version("matrixStats", version="1.1.0") # restart your session and run previous scripts👍3
...st one zero, cannot compute log geometric means
data frame with 0 columns and 0 rows
Error in `group_by_prepare()`:
! Must group by variables found in `.data`.
• Column `cluster` is not found.
Backtrace:
▆
1. ├─obj.markers %>% group_by(cluster) %>% ...
2. ├─dplyr:...
...don't work.You need to also specify an X-11 server on the host machine to handle the launch of GUId programs. If the client is a Windows machine install Xming. If the client is a Linux machine install XQuartz.Now suppose this is Windows connecting to Linux. In order to be able to launch X11 programs...
... -c -o khmm_wrap.o khmm_wrap.c
khmm_wrap.c: In function ‘SWIG_AsCharPtrAndSize’:
khmm_wrap.c:1576: error: ‘bool’ undeclared (first use in this function)
khmm_wrap.c:1576: error: (Each undeclared identifier is reported only once
khmm_wrap.c:1576: error: for each function it appears in.)
khm...
...有perl脚本如下：print "perl $0 <id_list> <out_file>\n" and die unless(@ARGV==2);open IN,"$ARGV[0]" or die "$!; can't open file $ARGV[0]\n";open OUT,">$ARGV[1]" or die "$!; can't open file $ARGV[1]\n";my%id;my%hash;while(<IN>){ chomp; my@a=split(/\s/...
...动欧洲各地的细菌菌群组成趋同。3. Root endosphere bacteria and A. thaliana exhibit stable associations（根内细菌和拟南芥种群存在稳定联系）首先作者将在80%以上地方都存在的微生物OTUs定义为地理广泛存在的OTUs，20%~80%定义为普遍存在的OTUs...
...WARNING: Running pip as the 'root' user can result in broken permissions and conflicting behaviour with the system package manager. It is recommended to use a virtual environment instead: https://pip.pypa.io/warnings/venv
以“root”用户运行pip可能导致权限中断，可以尝试使用虚...
...e/1488
optional arguments:
-h, --help show this help message and exit
-e expset, --expset expset
set event column name [required]
-i immu, --immu immu input data file path[required]
-m method, --method method
a character string ind...
...onoptional arguments: -h, --help show this help message and exit -i data, --data data input data file path[required] -t time, --time time set suvival time column name [required] -e event, --event event set event column name must 0 or 1 ...