课程资料已经更新了 ;重新下载一下
查看批次效应运行这个脚本时Rscript $scripts/seurat_DimPlot.r \
-i benihoppe_flower_sct/benihoppe_flower_sct.qs \
--reduction umap --label --group.by SampleID \
-p SampleID --pt.size 0.1 出现以下报错
[ reached 'max' / getOption("max.print") -- omitted 1 rows ]
Error in file(filename, "r", encoding = encoding) :
cannot open the connection
Calls: source -> file
In addition: Warning message:
In file(filename, "r", encoding = encoding) :
cannot open file '/work/benihoppe_flower/scripts/palette_colors.R': No such file or directory
Execution halted出现palette_colors.R这个脚本不存在