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4天前 发起提问
4天前 发起提问
2024-03-21 09:41 回答问题
报错是这样的：WARN GenomicsDBImport - GenomicsDBImport cannot use multiple VCF reader threads for initialization when the number of intervals is greater than 1. Falling back to serial VCF reader initialization.
2024-03-20 09:48 发起提问
2024-02-19 16:40 回答问题
以下是我的命令：/public/software/singularity/bin/singularity exec /public/home/perl5/gwas-sif/reseq.sif \ bash -c "gatk --java-options "-Xmx20g" GenomicsDBImport \ -L chr.list --tmp-dir $tmpdir -R $REF --batch-size 5 \ --reader-threads 5 --max-num-interv
2024-02-19 16:38 发起提问
2024-01-24 15:45 回答问题
老师，我在集群上重新下载了pop-evol-gwas.sh, 重新在课上的公众号下载了脚本，然后再运行GAPIT关联分析，但是还是有问题。Error in scan(file = file, what = what, sep = sep, quote = quote, dec = dec, : line 1 did not have 3 elements Calls: read.table -> scan In addition: Warning messages: 1: In rea
2024-01-23 11:43 发起提问
2024-01-18 22:28 回答问题
root@77146ac2bf18 21:42:19 /work/my_gwas/09.gwas_emmax]# emmax-kin-intel64 -v -d 10 -o ./pop.kinship.BN snp_var Reading TFAM file snp_var.tfam .... Memory allocated, nrows = 258, nheadercols = 6, nvaluecols = 0 Freeing cmat Freeing cheaders Memory
2024-01-18 22:21 发起提问