juicer 报错： Failure during chimera handling of

5 juicer 报错： Failure during chimera handling of

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juicer.sh -t 20 -s MboI -g hap0 -d /home/data/t090519/JF/20.Jui/juicer/work -D /home/data/t090519/JF/20.Jui/juicer -z /home/data/t090519/JF/20.Jui/juicer/references/hap0.fa -p /home/data/t090519/JF/20.Jui/juicer/hap0_MboI.chrom.sizes -y /home/data/t090519/JF/20.Jui/juicer/hap0_MboI.txt

老师好，在运行juicer时报错：

awk: calling undefined function and

input record number 1116, file /home/data/t090519/JF/20.Jui/juicer/work/splits/JF2.fastq.gz.sam

source line number 298

***! Failure during chimera handling of /home/data/t090519/JF/20.Jui/juicer/work/splits/JF2.fastq.gz

附件为nohup.out信息，报错在最后几行nohup.out

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分类：基因组学

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1 个回答

Ti Amo 34分钟前

To fix this, you'll need to install gawk(sudo apt install gawk) on your system.

5 juicer 报错： Failure during chimera handling of

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