找到约 15 条结果

文章 DevOps 从理论到实践指南

...d the cultural change, specifically the collaboration of the various teams involved in software delivery (developers, operations, quality assurance, management, etc.), as well as automating the processes in software delivery.Continuous delivery, on the other hand, is an approach to automate the deli...

文章 蛋白质亚细胞定位method

...of secondary structure and subcellular localization of apple BES1 proteins The secondary structure of apple BES1 Proteins was analyzed with NPS@: SOPMA secondary structure prediction (https://www.predictprotein.org/signin). The subcellular localization prediction of apple BES1 proteins was identifie...

文章 python版本MCScanX分析方法

...参考: Genomic synteny among C. annuum, C.chinenese and C.baccatum The genomes of C. annuum, C.chinenese and C.baccatum were retrieved from PGP (http://peppergenome.snu.ac.kr/download.php).The C. annuum genome was compared to C.chinenese and C.baccatum  genomes using the MCScan toolkit (V1....

文章 环境微生物领域杂志影响因子

NEW ENGLAND JOURNAL OF MEDICINE79.258LANCET53.254JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION47.661NATURE41.577SCIENCE41.058NATURE BIOTECHNOLOGY35.724NATURE REVIEWS MICROBIOLOGY31.851CELL31.398NATURE METHODS26.919BMJ-British Medical Journal23.259CLINICAL MICROBIOLOGY REVIEWS20.642Cell Metaboli...

文章 Bio-Linux中的生物信息学软件

... parallel, sequence assembler for short readsampliconnoise1.29Programs for the removal of noise from 454 sequenced PCR ampliconsarb5.5No descriptionarchaeopteryx0.972.beta9MA phylogenetic tree viewer and editorartemis16.0.0Free genome viewer and annotation toolassembly-conversion-tools0.01Conversion...

文章 TCGA数据分析机构及编码汇总 Center

...-tcga-users/tcga-code-tables/center-codes Code Center Name Center Type Display Name Short Name 中文 1 broad.mit.edu CGCC Broad Institute of MIT and Harvard BI 麻省理工学院和哈佛大学博劳德研究所 2 hms.harvard.edu CGCC Harvard Medical School HM...

文章 GWAS抗性性状处理,耐盐,耐寒,耐旱等

...查处理和对照的多种性状数据,然后计算抗性指数:  The response of the genotypes to salt stress was expressed using the stress susceptibility index (SSI) calculated according to Fischer and Maurer39 using the following formula: SSI = (1 − Ys/Yp)/D, where Ys = mean performa...

文章 教你如何使用u盘安装Linux系统

... 版本说明 CentOS-7-x86_64-DVD-2009.iso This DVD image contains all the packages that can be installed using the installer. This is the recommended image for most users. CentOS-7-x86_64-NetInstall-2009.iso This is the network install and rescue image. The installer will ask from where...

文章 qiime2自己建立分类器 greengene

...作为参考物种注释 # 导入参考序列 qiime tools import \   --type 'FeatureData[Sequence]' \   --input-path gg_13_8_otus/rep_set/99_otus.fasta \   --output-path 99_otus.qza # 导入物种分类信息 qiime tools import \   --type 'FeatureData[Taxonomy]' \   --input-format Head...

问题 基因组比对

...相关的课程呀?We analysed gene families shared between ash and 10 other species (Supplementary Table 10). In total, 279,603 proteins (77.14% of the input sequences) clustered into 27,222 groups, of which 4,292 contained sequences from all species, 3,266 were angiosperm-specific and 462 Eudico...

问题 老师 你好,我通过Git bash利用代码 tcga_gene_exp_download下载数据提示terminate called after throwing an instance of 'std::bad_alloc' what(): std::bad_alloc,无法分析后续数据

文章 核苷酸替换模型-GTR是所有模型中考虑参数最多最复杂的模型,其他所有模型是GTR模型的特例

...evomics.org/resources/substitution-models/nucleotide-substitution-models/ The use of maximum likelihood (ML) algorithms in developing phylogenetic hypotheses requires a model of evolution. The frequently used General Time Reversible (GTR) family of nested models encompasses 64 models with differe...

文章 鉴定组装植物病毒——系统详尽的植物病毒学!

.... . . . ................. . . . 12 RT-PCR and Real-Time RT-PCR Methods for the Detectionof Potato Virus Y in Potato Leaves and Tubers. . . ......................................................................  133 A New Method to Isolate Total dsRNA. . . . . . . ......................................

文章 Cufflinks,Stringtie 合并转录本之后,如何筛选新转录本?

...ses of a reference transcript)8rRepeat. Currently determined by looking at the soft-masked reference sequence and applied to transcripts where at least 50% of the bases are lower case9uUnknown, intergenic transcript10xExonic overlap with reference on the opposite strand11sAn intron of the transfrag ...

问题 关于使用nohup vcftools过滤vcf文件的问题

...ER=<ID=LowQual,Description="Low quality">##FORMAT=<ID=AD,Number=R,Type=Integer,Description="Allelic depths for the ref and alt alleles in the order listed">##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Approximate read depth (reads with MQ=255 or with bad mates are filtered)">...