找到约 15 条结果

问题 devtools安装出错 gert包按不上

...failed for ‘gert’ in dyn.load(file, DLLpath = DLLpath, ...):  unable to load shared object '/share/work/biosoft/R/R-v4.0.3/lib64/R/library/00LOCK-gert/00new/gert/libs/gert.so':   /usr/lib64/libgit2.so.26: undefined symbol: libssh2_userauth_publickey_frommemory Error: loading failed Executi...

问题 Error correction and assembling warnings: * 0:12:28.935 6768M / 13G WARN General (kmer_coverage_model.cpp : 327) Valley value was estimated improperly, reset to 16

这问题有什么解决办法吗

文章 GATK外显子测序数据肿瘤体细胞突变数据分析

...4.sort.dedup.bqsr.bam -I T154.sort.dedup.bqsr.bam \ -normal N154 --panel-of-normals somatic-hg38_1000g_pon.hg38.vcf.gz \ --germline-resource somatic-hg38_af-only-gnomad.hg38.vcf.gz \ -L S33613271_Regions.bed -O 154.raw.somatic.vcf.gz#-L 参数可以指定捕获区域#--panel-of-normals 指...

问题 dadi

... supported by the 14 tested models (Figs. 2A, S1), with a log‐likelihood of 141.756 and an AIC of 1354.21 (Table 1). Parameter estimates inferred that the divergence time of LO and LO was 0.61 Ma (95% CIs: 0.58–0.65), and the two diverged species had a second contact at 7109 years ago (95% CIs: ...

问题 Error correction and assembling warnings: * 0:12:28.935 6768M / 13G WARN General (kmer_coverage_model.cpp : 327) Valley value was estimated improperly, reset to 16

请问您这个谷值问题怎么解决的

问题 在提取1500bp序列做顺式作用元件检测时，使用tiquxulie.pl这个脚本，开始时显示out of memory，我把虚拟内存提高到了4G，显示zsh：killed,得到的结果还是空的，请问老师这个问题怎么解决呢？

谢谢老师。

问题 vcftools --gzvcf all.varFilter.vcf.gz --recode --recode-IN.............els |gzip - > clean.vcf.gz这一步输出的vcf.gz文件，用 bcftools query -l clean.vcf.gz | wc -l查看样本名出现报错

Failed to read from clean.vcf.gz: unknown file type 0 这是为什么呢

文章 获取virtualbox COM对象失败的处理办法

Failed to instantiate CLSID_VirtualBox w/ IVirtualBox, but CLSID_VirtualBox w/ IUnknown works. 我是 win7 64位 解决办法： 1， win+r 快捷键打开 “运行”，输入regedit 打开注册表 2，找到 HKEY_CLASSES_ROOT\CLSID\{00020420-0000-0000-C000-000000000046} Inproc...

问题 hmmersearch出现错误Error: Failed to open sequence file globins45 for reading，或者globins45换成globins45.fa也会出现同样的提示，这是什么原因呢，需要怎样操作才能正常运行呢？谢谢！

问题 关于RNAseq的docker分析中获取基因长度报错问题

...候总是出现报错，命令行为，python ../scripts/get_gene_length_from_gtf.py -g genome.gtf -p gene_length；报错信息为： Traceback (most recent call last):  File "../scripts/get_gene_length_from_gtf.py", line 51, in <module>    if kvs['gene_id'] in geneL and kvs['transcript_i...

问题 基因组重测序数据分析实战课程中的index.sh运行报错，显示没有对应的pl

各位老师好，我在学习基因组重测序数据分析实战，运行index.sh时，显示没有找到retrieve_seq_from_fasta.pl 这个代码，我去scripts里面找，确实也没有这个retrieve_seq_from_fasta.pl ，怎么办啊?

文章 SNP 过滤标准保证数据质量及参考文献：

...： https://gatk.broadinstitute.org/hc/en-us/articles/360035531112--How-to-Filter-variants-either-with-VQSR-or-by-hard-filtering SNP gatk VariantFiltration \ -V snps.vcf.gz \ -filter "QD < 2.0" --filter-name "QD2" \ -filter "QUAL < 30.0" --filter-name "QUAL30" \ -filter "SOR...

问题 老师您好!我在做mcscan分析时blastall出错，显示两个错误，首先是unable to open output file mcscan/ChaShu.blast,第二个是return non-zero status. 请问老师这种情况应该怎么处理呀?

问题 基因组注释进行deepTE 分类时报错，The TensorFlow library was compiled to use SSE4.1 instructions, but these aren't available on your machine. Aborted (core dumped)

问题 RNAseq有参转录组数据自主分析课程 ，运行建立基因组索引命令时，报错，无法获取gene_length.txt文件，请问是什么原因？如何处理呢？

...Toona_sinensis.gene.gff 报错信息如下：get gene length and gene.bed from gtf: RUN CMD: python /work/TS/scripts/get_gene_length_from_gtf.py -g Toona_sinensis.gene.gtf -p gene_length Traceback (most recent call last):   File "/work/TS/scripts/get_gene_length_from_gtf.py", line 53, in <mo...