...one or more arguments or inputs in your command are incorrect.
##### ERROR The error message below tells you what is the problem.
##### ERROR
##### ERROR If the problem is an invalid argument, please check the online documentation guide
##### ERROR (or rerun your command with --help) to view allowab...
...，有如下报错：
Error in GDCprepare(query) :
I couldn't find all the files from the query. Please check if the directory parameter is right or ‘GDCdownload’downloaded the samples.
我尝试了改路径，下载到我指定的文件夹（因为GDCprepare是默认的GDCdata文件夹）...
....egg/skbio/diversity/alpha/_ace.py", line 70, in ace
raise ValueError("The only rare OTUs are singletons, so the ACE "
ValueError: The only rare OTUs are singletons, so the ACE metric is undefined. EstimateS suggests using bias-corrected Chao1 instead.
这是因为ace指数通过那些稀有otu...
...
参考文献：
Du Juan,Wang Shoudong,He Cunman et al. Identification of regulatory networks and hub genes controlling soybean seed set and size using RNA sequencing analysis.[J] .J. Exp. Bot., 2017, 68(8): 1955-1972.
...
参考文献：
Du Juan,Wang Shoudong,He Cunman et al. Identification of regulatory networks and hub genes controlling soybean seed set and size using RNA sequencing analysis.[J] .J. Exp. Bot., 2017, 68(8): 1955-1972.
...omType = opt$idtype, toType = opt$totype, OrgDb = opt$ann.db) :
26.02% of input gene IDs are fail to map...
--> No gene can be mapped....
--> Expected input gene ID:
--> return NULL...
NULL
Error in (function (classes, fdef, mtable) :
unable to find an inherited method for fu...