问题 启动bio-linux错误，打开了VT的。VERR_FILE_NOT_FOUND

问题 docker运行qiime1时按照教程进行到章节2课时6时，即聚类生成OTU-denovo时老是报错，查看类似问题后，升级了运行内存为70g，同时将教程内的30多个样本减成2个样本，FASTQ格式还有qimme格式检查都正确，依旧报错，报错内容如下：Segmentation fault

...fc-list. This may take a moment.') Traceback (most recent call last):   File "/biosoft/miniconda/envs/qiime1/bin/pick_de_novo_otus.py", line 180, in <module>     main()   File "/biosoft/miniconda/envs/qiime1/bin/pick_de_novo_otus.py", line 177, in main     status_update_callback=sta...

问题 Error in (function (classes, fdef, mtable) : unable to find an inherited method for function ‘bg.correct’ for signature ‘"HTAFeatureSet", "character"’

对GEO数据进行mas5处理时报错。。不知道如何处理？？ Error in (function (classes, fdef, mtable)  :    unable to find an inherited method for function ‘bg.correct’ for signature ‘"HTAFeatureSet", "character"’

文章 基因组注释分析方法

... combination of structure-based and homology-based approaches was employed to identify TEs and other repeat regions. First, miniature inverted repeat transposable elements (MITEs) and long terminal repeat (LTR) elements were annotated by structure-based methods. The former was performed by MITE Hunt...

文章 mysql启动时报错：error while loading shared libraries: libncurses.so.5: cannot open shared object file

...r while loading shared libraries: libtinfo.so.5: cannot open shared object file: No such file or directory 根据报错内容可以看出，是因为在启动mysql的时候加载了libtinfo.so.5库文件。此时我们可以查看redhat9系统中是否存在改库文件。 [root@server bin]# f...

问题 视频中的百度网盘安装的Eclipse，没有视频中的Open Projects from Files

问题 TCGA下载数据报错“I could not find the file”

我按照教程执行命令，想借此下载自己感兴趣的数据 在执行到GDC下载这一步，突然出现下载数据找不到，而出现下载中断，无法继 还有个问题，查询到的样品数目为何和癌症和癌旁样本加起来不一样。。。。少的去哪里了

问题 基因组重测序，read比对到参考基因组时出现truncated file怎么办

做了有十来个数据了，第一次在这里出问题，这怎么处理啊，谢谢各位大佬。

文章 TCGA 临床随访信息follow up 各列介绍：

...  typeproject_idsubmitter_idcases.submitter_iddiagnoses.submitter_iddays_to_follow_upadverse_eventadverse_event_gradeaids_risk_factorsbarretts_esophagus_goblet_cells_presentbmibody_surface_areacause_of_responsecd4_countcdc_hiv_risk_factorscomorbiditycomorbidity_method_of_diagnosisdays_to_adverse_e...

问题 导入linux虚拟电脑时出现错误VBOX_E_FILE_ERROR (0x80BB0004)

如题，

问题 利用geneid_to_mRNAid提取GFF3文件中的信息时候，发现存在很多假基因导致提取失败，想知道这种情况应该如何解决？？

问题 genome-annotation缺失tantan

在用omicsclass/genome-annotation镜像进行注释时报错，代码如下“funannotate mask -i pilon_polished2.fasta -o tz-mask.fasta”，提交后显示“Missing Dependencies: tantan.  Please install missing dependencies and re-run script”。请问老师如何解决依赖项缺失问题

问题 Rstudio server 报错可能原因，重启 服务器之后

2024-10-16T04:36:29.877113Z [rserver] ERROR Unable to determine real path of R script /share/biosoft/R/latest/bin/R (system error 13 (Permission denied)); LOGGED FROM: bool rstudio::core::r_util::{anonymous}::validateRScriptPath(const string&, std::string*) src/cpp/core/r_util/REnvironmentPosix....

文章 CentOS 7 yum安装报错

...eds from cached hostfileCould not retrieve mirrorlist http://mirrorlist.centos.org/?release=7&arch=x86_64&repo=extras&infra=stock error was14: curl#6 - "Could not resolve host: mirrorlist.centos.org; Unknown error" One of the configured repositories failed (Unknown), and yum doesn't ha...

问题 -bash: SNP/S126-R132.HaplotypeCaller.log: No such file or directory

...log& 产生错误：-bash: SNP/S126-R132.HaplotypeCaller.log: No such file or directory