.... 4003 associations loaded.
Blast2GO build: 23092011
Change b2g-properties file to: b2gPipe.properties
Blast2go.version=2.5.0
Blast2GO can not reach the Internet
Blast2GO started (without GUI)
create new Project
set new Project
Hit description position set to: 5
Hit description filter set to:
GoWei...
...设置为1，依旧提示报错：Failed to create bus connection: No such file or directory
--> No gene can be mapped....
--> Expected input gene ID: LOC105382119,LOC105392385,LOC105383189,LOC105384039,LOC105384627,LOC105384151
--> return NULL...
Error in barplot.default(kegg, showCate...
MCScanX 安装问题：
make报错：
g++ struct.cc mcscan.cc read_data.cc out_utils.cc dagchainer.cc msa.cc permutation.cc -o MCScanXmsa.cc: In function ‘void msa_main(const char*)’:msa.cc:289:22: error: ‘chdir’ was not declared in this scope if (chdir(html_fn)<0) ...
...was used to sort and index the resulting Binary Alignment Map (BAM) format files[2]. Mark duplicates in Picard tools(v1.102) (http://broadinstitute.github.io/picard/) was used to discard duplicates, and the final sorted bam results were used for downstream analysis;
Variant calling and filt...
计算IBD 时，找不到cibd.py这个脚本，
python3: can't open file '/work/script/cibd.py': [Errno 2] No such file or directory
python3: can't open file '/work/script/cibd.py': [Errno 2] No such file or directory
python3: can't open file '/work/script/cibd.py': [Errno 2] No such file or dire...
... script is used to an error_bar')parser.add_argument('-i','--in_dir',help='Please input in_dir directory path',required=True)args = parser.parse_args()pathDir = os.listdir(args.in_dir)for allDir in pathDir: if (re.search(r'png$',allDir)): child = os.path.join('%s/%s' % (args.in_d...
...on/tmp/q2-AlignedDNAFASTAFormat-3r8bwdoj is not a(n) AlignedDNAFASTAFormat file:
The sequence starting on line 2 was length 404. All previous sequences were length 0. All sequences must be the same length for AlignedFASTAFormat.
Debug info has been saved to work/my_amplicon/tmp/qiime2-q2cl...
...Genename <- get_map("../gencode.v34.annotation.gff3")
Treat input as file
|--------------------------------------------------|
|==================================================|
Warning message:
In data.table::fread(input, header = FALSE) :
Stopped early on line 266653. Expected 9 fi...
...construction finished ...
Save Graph
Calculate graph layout
Generating DOT file
Generating DOT file
Graph Layout: GONAMEANDID
Graph Layout: GONAMEANDID
false
Graph-Layout-Webservice has problems or is not avalible from:
http://188.138.116.14/b2gws_axis2
Details: The host did not accept the connectio...