问题 提取蛋白编号信息

...还得请教老师来解决，谢谢 use Bio::SeqIO;use Bio::Seq;my$in = Bio::SeqIO->new(-file => "$ARGV[1]" , -format => 'Fasta');my$out = Bio::SeqIO->new(-file => "$ARGV[2]" , -format => 'Fasta');my%keep=();open IN, "$ARGV[0]" or die "$!";while(<IN>){chomp;next if /^...

问题 老师，您好，我用cytoscape conet绘制微生物网络图，用原始biom文件还是txt文件均报错，报错内容为java.lang.NumberFormatException: You did not specify the row and column number of the matrix correctly! 请问是什么原因，

问题 老师，我在用GATK的VariantFiltration过滤SNP的时候，遇到了报错java.lang.IllegalArgumentException: Inconsistent number of provided filter names and expressions: names=[PASS, my_snp_filter] exps=[QD < 2.0 || MQ < 40.0 || FS > 60.0]

文章 R语言绘制差异表达火山图

...ang, Z., & Wade-Martins, R. (2024). Single-cell spatial transcriptomic and translatomic profiling of dopaminergic neurons in health, aging, and disease. Cell reports, 43(3), 113784. https://doi.org/10.1016/j.celrep.2024.113784

文章 R安装报错：configure: error: --with-readline=yes (default) and headers/libs are not available

这个错误表示在编译某个软件时，没有找到 readline 库。Readline 库提供了命令行交互式输入的功能，很多软件都依赖它。要解决这个问题，您可以按照以下步骤进行操作： 检查 readline 库是否已经安装。可以使用以下命令来检查...

问题 Error in getopt(spec) : flag "l" requires an argument怎么处理

问题 是没有gene-family了嘛

...mily:v1.0.1 What's next:     View a summary of image vulnerabilities and recommendations → docker scout quickview omicsclass/gene-family:v1.0.1 Error response from daemon: pull access denied for omicsclass/gene-family, repository does not exist or may require 'docker login': denied: request...

文章 An introduction to PERMANOVA and ANOSIM

PERMANOVA（Permutational Multivariate Analysis of Variance）和 ANOSIM（Analysis of Similarities）都是用于分析和比较群组间多元数据差异的统计方法。它们特别适用于生态和环境科学领域，但也可应用于其他需要分析复杂数据集的科学研究。这两...

问题 利用perl script/get_gene_weizhi.pl -in1 new_like_pep.id.txt -in2 westar.v0.gff3 -out DA1_weizhi.txt 提取位置信息后得到的txt里面没有东西，请问是为什么呀

问题 docker desktop安装 Unexpected token n in JSON at position

安装好docker desktop后setting时，出现这个问题，请问该怎么解决呢

问题 参考基因组建立索引报错，这是什么原因？

...Picard's command line syntax is changing. ********** ********** For more information, please see: ********** https://github.com/broadinstitute/picard/wiki/Command-Line-Syntax-Transition-For-Users-(Pre-Transition) ********** ********** The command line looks like this in the new syntax: ******...

文章 软件fastsimcoal2输入文件说明

...me: Number of linkage blocks 1 //per Block: data type, num loci, rec. rate and mut rate + optional parameters MICROSAT 10 MUTRATE 0.0005 0 # 10个微卫星标记，重组率为MUTRATE，变异率为0.0005参数（NPOP、TEXP、RESIZE和MUTRATE等）的分布如果在估计文件中被找到，则将...

文章 图片去除大块黑色区域

...cription='This script is used to an error_bar')parser.add_argument('-i','--in_dir',help='Please input  in_dir directory path',required=True)args = parser.parse_args()pathDir =  os.listdir(args.in_dir)for allDir in pathDir:    if (re.search(r'png$',allDir)):        child = os.path.join('%s/%s...

问题 在做MCScanX分析时出现exception in thread main java lang是怎么回事？

文章 docker 报错 error during connect: In the default daemon configuration on Windows,

error during connect: In the default daemon configuration on Windows, the docker client must be run with elevated privileges to connect.: Get "http://%2F%2F.%2Fpipe%2Fdocker_engine/v1.24/images/search?limit=25&term=omicsclass": open //./pipe/docker_engine: The system cannot find the file specifi...