对GEO数据进行mas5处理时报错。。不知道如何处理??
Error in (function (classes, fdef, mtable) :
unable to find an inherited method for function ‘bg.correct’ for signature ‘"HTAFeatureSet", "character"’
There was a problem importing manifest:
manifest is not a(n) PairedEndFastqManifestPhred33V2 file:
Filepath on line 1 and column "forward-absolute-filepath" could not be found ($PWD/home/qiime2/Public/data/dyj/HS15_1.fq.gz) for sample "HS15".
... is placed some distance away from the axes. The defaults are c(0.05, 0) for continuous variables, and c(0, 0.6)for discrete variables.连续性和离散型都涉及,默认值不同,离散型scale_y_discrete 或者scale_x_discrete,这里针对连续性进行介绍:
参考画图数据和...
...seeker包时出现下面报错:
Error: package or namespace load failed for ‘ChIPseeker’ in dyn.load(file, DLLpath = DLLpath, ...): unable to load shared object '/share/work/biosoft/R/R-v4.2.0/lib64/R/library/data.table/libs/data_table.so': /share/work/biosoft/lib/libgomp.so.1: version `GO...
...:
输入文件句柄:
fastq文件
open my $FQ ,"zcat infile.fq.gz|" or die "$!";
my$fq=Bio::SeqIO->new(-fh=>$FQ,-format=>'fastq');
fasta文件
open my $FA ,"zcat infile.fa.gz|" or die "$!";
my$fa=Bio::SeqIO->new(-fh=>$FA,-format=>'fasta');
输出文件句柄...
...s used to call variants from the 16 Illumina WGS barn swallow individuals.#for steps 1-3, this github solution was followed: https://github.com/vgteam/vg/issues/3411#for steps 4-9, the section "Calling the graph by first splitting into components" of this tutorial was followed: https://github.com/...