问题 用linux系统做gwas时运行脚本报错[Thread-9] ERROR net.maizegenetics.plugindef.AbstractPlugin - 0

...ific BLAS/LAPACK not found. Using system-independent EJML for DoubleMatrix operations. [Thread-9] INFO net.maizegenetics.plugindef.AbstractPlugin -  Usage: FixedEffectLMPlugin <options> -phenoOnly <true | false> : Should the phenotype be analyzed with no markers and BLUEs generated?...

问题 circos 分析

...RCOS ERROR ***      cwd: /work/cm01_reseq_demo/8.circos      command: /biosoft/miniconda/envs/reseq/bin/circos -conf      /work/cm01_reseq_demo/8.circos/circos.conf -outputdir      /work/cm01_reseq_demo/8.circos -outputfile circos  CONFIGURATION FILE ERROR  Could not parse valu...

问题 老师好，我在使用SNP2CAPS软件时输入文件后显示Loaded data of 0 marker(s) and sequence(s). 显示没有加载到标记和序列，求解是什么问题呢

问题 Error correction and assembling warnings: * 0:12:28.935 6768M / 13G WARN General (kmer_coverage_model.cpp : 327) Valley value was estimated improperly, reset to 16

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话题 Error in newCountDataSet

文章 ppi_network.r 蛋白互作网络分析

...isoptional arguments:  -h, --help            show this help message and exit  -g gene.list, --gene.list gene.list                        diff expressed gene list file, required  -s ann.db, --species ann.db                        NCBI taxonomy identifiers of the organ...

问题 Error correction and assembling warnings: * 0:12:28.935 6768M / 13G WARN General (kmer_coverage_model.cpp : 327) Valley value was estimated improperly, reset to 16

这问题有什么解决办法吗

问题 Error correction and assembling warnings: * 0:12:28.935 6768M / 13G WARN General (kmer_coverage_model.cpp : 327) Valley value was estimated improperly, reset to 16

请问您这个谷值问题怎么解决的

问题 Error in seq.default(grps[start] + 1, grps[start + 1] - 1) : 'from' must be of length 1此外: Warning messages: 1: In file(con, "r") : InternetOpenUrl失败:’不能连接到吊销服务器，或者未能获得最终响应。' 2: In readLines(...) : 读'http://bioconductor.org/config.yaml'时最后一行未遂

在rstudio中运行 BiocManager::install("TCGAbiolinks")，迟迟无法下载数据，并显示上方错误，请问怎么解决

问题 vcftools过滤除了等位基因选项外，其他参数通通没用

...参数过滤： vcftools --gzvcf all.varFilter.vcf.gz --recode --recode-INFO-all --stdout \     --maf 0.05  --max-missing 0.4  --minDP 4  --maxDP 1000  \     --minQ 30 --minGQ 80 --min-alleles 2  --max-alleles 2 |gzip - > all.clean.vcf.gz 结果是After filtering, kept 0 out of a pos...

问题 在建立索引时出错，输出文件都是0KB

...Picard's command line syntax is changing. ********** ********** For more information, please see: **********  https://github.com/broadinstitute/picard/wiki/Command-Line-Syntax-Transition-For-Users-(Pre-Transition) ********** ********** The command line looks like this in the new syntax: ****...

文章 indel vcf文件转化为SNPT输入文件

...                     ) or &USAGE;&USAGE unless ($infile and $out);sub USAGE {#        my $usage=<<"USAGE";Program: $0Version: $version==================================================================================================Discription:        This script is u...