找到约 15 条结果

文章 ANNOVAR琳琅满目的人类变异信息注释数据库

...色标识(gieStain)‘1000g2015aug’ for alternative allele frequency in the 1000 Genomes Project 。1000基因组项目(和ExAV 外显子集合联合一样,是公开、开放的数据库)里面供选择的等位基因频率信息。‘exac03’for the variants reported in the Exome Aggregati...

文章 DevOps 从理论到实践指南

...t, software development, and operations professionals.It seeks to automate the process of software integration, testing, deployment, and infrastructure changes by establishing a culture and environment where building, testing, and releasing software can happen rapidly, frequently, and more reliably....

问题 变异结果质控过滤,去掉低质量变异结果时报错i

...String,Description="Physical phasing haplotype information, describing how the alternate alleles are phased in relation to one another; will always be heterozygous and is not intended to describe called alleles"> Warning: Expected at least 2 parts in FORMAT entry: ID=PID,Number=1,Type=String,Des...

文章 正选择分析之 Site Models

...这两组比较进行LRT检验来验证正选择。不过Prof.Yang认为,The M1-M2 comparison 与 the M7- M8 comparison相比,更加的稳定。M7和M8俩模型计算时间会长一些,如果要进行分析的基因较多,可以考虑不比较 M7- M8。 如何检测positive sites? 在C...

问题 RNA 速率分析Pseudotime vs latent time

...enerates a metric known as latent time. I am having a very had time seeing the difference between latent time and standard pseudotime analysis (usually carried out by slingshot, monocle 3, or PAGA) and whether one of them is redundant or not.

用户 晓屿Li_Isle of faces

问题 tassel 报错

 ERROR net.maizegenetics.plugindef.AbstractPlugin - Matrix size exceeds the size of an integer

问题 New state of 'nil' is invalid

...老师的教程输入命令进入虚拟机时一直报这个“New state of 'nil' is invalid”。尝试卸载Docker Desktop后重启电脑重新安装还是这样。这种情况应该怎么办呢?

文章 TCGA临床数据下载—TCGAbiolinks

...据有以下三种类型,以及他们的区别如下: In GDC database the clinical data can be retrieved from different sources: indexed clinical: a refined clinical data that is created using the XML files.XML files: original source of the dataBCR Biotab: tsv files parsed from XML files Ther...

话题 Too many levels of symbolic links

文章 immune_infiltrates_rnaseq.r RNA-seq 转录组数据免疫侵润分析

...                   [optional]  --tpm                 whether convert fpkm to tpm [optional, default: False]  -o outdir, --outdir outdir                        output file directory [default cwd] 参数说明: -i 输入基因表达量文件,建议用TPM标准...

文章 R 包安装报错:configure: error: gdal-config not found or not executable.

... * removing ‘/share/work/biosoft/R/R-v3.6.1/lib64/R/library/adegenet’ The downloaded source packages are in ‘/tmp/RtmpuYCUHI/downloaded_packages’ Updating HTML index of packages in '.Library' Making 'packages.html' ... done Warning messages: 1: In install.packages("adegenet") : in...

文章 Docker Volume - 目录挂载以及文件共享

Docker Volume - 目录挂载以及文件共享  发表于 2019-02-25 |  分类于 docker相关 |  |  阅读次数: 4169 前言Docker中的数据可以存储在类似于虚拟机磁盘的介质中,在Docker中称为数据卷(Data Volume)。数据卷可以用来存储Docker应用...

问题 在RStudio中安装WGCNA包后调用WGCNA包提示错误

...需要的程辑包:fastcluster 载入程辑包:‘fastcluster’ The following object is masked from ‘package:stats’:     hclust Error: package or namespace load failed for ‘WGCNA’ in rbind(info, getNamespaceInfo(env, "S3methods")):  number of columns of matrices must mat...

文章 分离NR NT库,快速blast本地比对同源注释基因

...n"; } } for my $i (keys %fout){ $fout{$i}->close(); } 2021 NCBI又更新:https://www.omicsclass.com/article/1614 更多生物信息课程:https://study.omicsclass.com/index