如题:python3.7 环境,Orthofinder最新版本,运行demo数据没问题
需要比对的序列长度不一,psi-blast比对是可以比上的。拿到这些数据单独再去比较就出现了报错。请问出现这个报错是不是说明没有找到
Traceback (most recent call last):
File "OrthoFinder-master/orthofinder.py", line 7, in <module>
main(args)
File "/home/nick/data/software/scripts/cluster/reanalysis_20250731/psiblast/mmseq2/OrthoFinder-master/scripts_of/__main__.py", line 1344, in main
GetOrthologues(speciesInfoObj, options, prog_caller)
File "/home/nick/data/software/scripts/cluster/reanalysis_20250731/psiblast/mmseq2/OrthoFinder-master/scripts_of/__main__.py", line 997, in GetOrthologues
i_og_restart=i_og_restart)
File "/home/nick/data/software/scripts/cluster/reanalysis_20250731/psiblast/mmseq2/OrthoFinder-master/scripts_of/orthologues.py", line 1007, in OrthologuesWorkflow
results_name, root_from_previous, i_og_restart)
File "/home/nick/data/software/scripts/cluster/reanalysis_20250731/psiblast/mmseq2/OrthoFinder-master/scripts_of/orthologues.py", line 1103, in InferGeneAndSpeciesTrees
i_og_restart=i_og_restart)
File "/home/nick/data/software/scripts/cluster/reanalysis_20250731/psiblast/mmseq2/OrthoFinder-master/scripts_of/trees_msa.py", line 339, in DoTrees
iOgsForSpeciesTree, fSingleCopy = DetermineOrthogroupsForSpeciesTree(ogMatrix, iogs4)
File "/home/nick/data/software/scripts/cluster/reanalysis_20250731/psiblast/mmseq2/OrthoFinder-master/scripts_of/trees_msa.py", line 170, in DetermineOrthogroupsForSpeciesTree
fractions, nOrtho = GetOrthogroupOccupancyInfo(m)
File "/home/nick/data/software/scripts/cluster/reanalysis_20250731/psiblast/mmseq2/OrthoFinder-master/scripts_of/trees_msa.py", line 148, in GetOrthogroupOccupancyInfo
f = 1./N
ZeroDivisionError: float division by zero