问题 gff3_file_to_proteins.pl 报错

老师，统一了格式还是会出现，这种情况会是哪里有问题呢

文章 提取 VCF 文件中的基因型信息

...命令可以提取所有样本的基因型： bcftools query -f '%GT\n' your_file.vcf 还可以根据需要自定义输出格式。 2.VCFtools VCFtools 是一个流行的 VCF 文件处理工具集，它提供了许多功能，包括提取基因型信息。你可以使用 --extract-FORMAT-info ...

文章 textshaping L :1:19: fatal error: hb-ft.h: No such file or directory

... harfbuzz fribidi (OSX)If harfbuzz freetype2 fribidi is already installed, check that 'pkg-config' is in yourPATH and PKG_CONFIG_PATH contains a harfbuzz freetype2 fribidi.pc file. If pkg-configis unavailable you can set INCLUDE_DIR and LIB_DIR manually via:R CMD INSTALL --configure-vars='INCLUDE_DI...

问题 devtools安装出错 gert包按不上

... Error: package or namespace load failed for ‘gert’ in dyn.load(file, DLLpath = DLLpath, ...):  unable to load shared object '/share/work/biosoft/R/R-v4.0.3/lib64/R/library/00LOCK-gert/00new/gert/libs/gert.so':   /usr/lib64/libgit2.so.26: undefined symbol: libssh2_userauth_publickey_fro...

问题 hmmsearch出现Error: Failed to open sequence file aa.fasta>uu.out for reading，如何解决呢？？

Error: Failed to open sequence file aa.fasta>uu.out for reading

问题 请问老师怎么获得这个gff3_file_to_proteins.pl脚本来着？

问题 基因家族hmmsearch时提示Failed to open tabular per-dom output file result.txt for writing

基因家族提取用hmmsearch --domtblout result.txt --cut_tc zf-C2H2.hmm  Fvesca_226_v1.1.protein.fa 时提示 Failed to open tabular per-dom output file result.txt for writing 

问题 Failed to create bus connection: No such file or directory

输入文件 运行代码 #go 富集分析 Rscript $scriptdir/go_enrich.r -l gene.list  -n $scriptdir/go2name.tsv  \   -g go2gene.tsv -o go 输出文件 咱们的课程是输出很多文件，但是我只能输出一个

问题 Error, no sequence for chr1 at xxxxxxxxxxxxxxx/util/gff3_file_to_proteins.pl line 82.

gff3_file_to_proteins.pl用这个工具时报了这个错，是什么原因啊，老师能帮忙解答下吗？

问题 您好，请问一下 Failed to open sequence file GCF-000001735.4-TAIR10.1-protein.faa for reading，hmmsearch出现这种怎么解决呀

您好，请问一下 Failed to open sequence file GCF-000001735.4-TAIR10.1-protein.faa for reading，hmmsearch出现这种怎么解决呀

文章 安捷伦Agilent 外显子捕获试剂盒捕获区域bed文件下载

...https://earray.chem.agilent.com/suredesign/help/Target_enrichment_design_files_available_for_download.htm BED files You can import these files into a compatible genome browser to graphically view the locations of the tracks in the genome. [design ID]_Covered.bed - This BED file contains a single...

文章 三代纠错软件LoRDEC安装

...H 解压并编译： tar -xjvf lordec-src_0.9.tar.bz2cd lordec-src_0.9make clean all -j8 报错1: 提示/usr/bin/cc 下的gcc版本低，发现自己安装的gcc的bin目录没有链接好cc： 可将/share/work/biosoft/gcc/gcc-v6.4.0/bin/ 下的gcc链接成cc cd /share/work/biosoft/gcc/...

问题 Error, no sequence for chr1 at /wcr/TransDecoder/util/gff3_file_to_proteins.pl line 82.

你好，你运行脚本的时候遇到问题了吗？Error, no sequence for chr1 at xxxxxxxxxxxxxxxx/util/gff3_file_to_proteins.pl line 82.

问题 gwas分析群体画进化树

...: ignoring environment value of R_HOME --> Q&A for bioinformatics, please visit the website: https://www.omicsclass.com/ --> R beginners ? I suggest your  learning  R language: https://study.omicsclass.com/index Registered S3 methods overwritten by 'treeio':   method          ...

问题 Failed to open tabular per-dom output file zf-C2H2.txt for writing怎么解决