找到约 15 条结果

文章 NCBI 蛋白数据库分库

...nt        |#nodes.dmp file consists of taxonomy nodes. The description for each node includes the following#fields:#        tax_id                                  -- node id in GenBank taxonomy database#        parent tax_id                           -- pa...

文章 VirtualBox 中练习安装linux系统centos7

...OS/CN99 Corp.http://mirrors.cn99.com/centos/Dalian Neusoft University of Informationhttp://mirrors.neusoft.edu.cn/centos/HUAWEI CLOUDhttp://mirrors.huaweicloud.com/centos/Lanzhou University Open Source Societyhttp://mirror.lzu.edu.cn/centos/Nanjing Universityhttp://mirrors.nju.edu.cn/centos/NetEaseh...

问题 在运行这段代码时出现Invalid value for '--m-metadata-file': Metadata column is of type 'numeric', but expected Categorical.

...总  mkdir -p collapse_table_group mkdir -p collapse_table_group   for g in  type time;do   #这里的type group  来自metadata文件  #--p-mode <up to you, there's sum, median-ceiling, and mean-ceiling>   qiime feature-table group \      --i-table feature-table-final.qza \ ...

问题 LTR_retriever结果问题

老师您好,请问课程重复序列注释中,对于LTR_retriever结果文件,哪一个统计了 solo-LTR 的结果,.nmtf.pass.list 这个文件里面的是不是都是solo LTR?

文章 Rocks reinstall on compute node, after disk rebuild, fails

...[ date ] [ thread ] [ subject ] [ author ] I think on key tidbit of information would help you here. You only run insert-ethers when you are trying to install a NEW appliance (e.g. compute node). If you just want to re-install an existing node, you do not use insert-ethers. Insert-ethers is a...

文章 bedtools批量提取基因组指定位置序列

... file of ranges to extract from -fi        -name   Use the name field for the FASTA header        -split  given BED12 fmt., extract and concatenate the sequencesfrom the BED "blocks" (e.g., exons)        -tab    Write output in TAB delimited format.                - Default i...

文章 Bio-Linux中的生物信息学软件

...d to quickly group sequencescdbfasta20100722Constant DataBase indexing and retrieval tools for multi-FASTA fileschimeraslayer20101212+dfsgdetects likely chimeras in PCR amplified DNAclcsequenceviewer6.4CLC Free Sequence Viewerclearcut1.0.9Relaxed Neighbor Joiningclustalw2.1+lgplNo descriptionclustal...

问题 Error response from daemon: Get "https://registry-1.docker.io/v2/": tls: failed to verify certificate: x509: certificate is valid for *.ouc.edu.cn, ouc.edu.cn, not registry-1.docker.io

docker下载出现这种问题要怎么处理呢?linux系统(Ubuntu),非常着急,感恩感谢

问题 是没有gene-family了嘛

...csclass/gene-family:v1.0.1 Error response from daemon: pull access denied for omicsclass/gene-family, repository does not exist or may require 'docker login': denied: requested access to the resource is denied PS C:\Users\Administrator> docker search omicsclass NAME                  ...

问题 MUMmer共线性分析报错suffix tree construction failed: textlen=712946597 larger than maximal textlen=536870908

...ding input file "nucmer.ntref" of length 712946597 # construct suffix tree for sequence of length 712946597 # (maximum reference length is 536870908) # (maximum query length is 4294967295) # process 7129465 characters per dot /usr/bin/mummer: suffix tree construction failed: textlen=712946597 larger...

文章 基因组Hic挂载AGP文件格式说明

... the start of an acrocentric chromosome;heterochromatin,a gap inserted for an especially large region of heterochromatic sequence;telomere,a gap inserted for the telomere;repeat,an unresolvable repeat。 8. 小片段结束或gap是否被连接(component_end or linkage)     如果第5...

文章 癌症缺氧相关基因查找,以及样本分类方法 ,免疫微环境

...7, CDKN3, TPI1, ALDOA, MIF, PGAM1, LDHA, P4HA1, SLC2A1, NDRG1, and VEGFA, which have been shown to perform the hypoxia status (12, 24). two different hypoxia status groups (cluster1 and cluster2) among 1104 TCGA BRCA tumor samples were selected by using ConsensusClusterPlus package with 50 it...

文章 stack的利用

...配的例子: def is_matching_parentheses(string): stack = [] for char in string: if char == '(': stack.append(char) elif char == ')': if len(stack) == 0 or stack.pop() != '(': return False return len(stack) == 0 在这个例子...

问题 rJava 安装包错

Error: package or namespace load failed for ‘rJava’:  .onLoad failed in loadNamespace() for 'rJava', details:   call: dyn.load(file, DLLpath = DLLpath, ...)   error: unable to load shared object '/share/work/biosoft/R/R-v4.2.0/lib64/R/library/rJava/libs/rJava.so':   libjvm.so: cannot ope...

文章 Perl 变量命名规则

...tal_score$root_node 对于查表的数组或者哈希,采用 xxx_of, xxx_for的命名方式,也就是在末端加上介词,比如。 my %title_of;my %ISBN_for;my @sales_from; 这种写法会使后面的代码可读性极好。 while (my $month = prompt -menu => $MONTH_NAMES) {for my $book (...