...,我用了python脚本
import gzipimport argparsedef extract_gene_names(input_fastq_gz, output_file): with gzip.open(input_fastq_gz, 'rt') as fastq_gz, open(output_file, 'w') as out_file: line_count = 0 for line in fastq_gz: line_count += 1 ...
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To get the following information please change the clinical.info argument
=> new_tumor_events: new_tumor_event
=> drugs: drug
=> follow_ups: follow_up
=> radiations: radiation
Parsing follow up version: follow_up_v1.0
|...
...ction2 二代组装:spades assemblies3 混合组装:assembling contigs and long reads with miniasm4 比对:aligning reads5 搭桥:building long read bridges6 抛光:polishing assembly with pilon
组装结果
参考:https://www.jianshu.com/p/6ac7762a8f3a
The virtual machine 'Bio-Linux-8.0.7' has terminated unexpectedly during startup with exit code 1 (0x1). More details may be available in 'D:\VirtualBox VMs\Bio-Linux-8.0.7\Logs\VBoxHardening.log'.
...cted cdsParts=true, but the ID (gene-si:)seems to be no CDS part.Exception in thread "main" java.lang.RuntimeException: Did not finish as intended. java.lang.IllegalArgumentException: You selected cdsParts=true, but the ID (gene-si:)seems to be no CDS part. 应该如何解决呢