文章 三代数据SV检测软件安装与使用——cuteSV

...件安装软件可以直接从GitHub上下载安装，非常方便。pip install cuteSV#或conda install -c bioconda cutesv#或git clone https://github.com/tjiangHIT/cuteSV.git && cd cuteSV/ && python setup.py install 注意，该软件是用Python3版本编写的，内部调用了...

文章 easySFS的使用

...aacovercast/easySFS: Effective selection of population size projection for construction of the site frequency spectrum. Convert VCF to dadi/fastsimcoal style SFS for demographic analysis 2. 位点频谱(SFS)计算 - 简书 (jianshu.com)

文章 TCGA中癌症的名称，简写和中文名称

...asive carcinoma 乳腺浸润癌 CESC Cervical squamous cell carcinoma and endocervical adenocarcinoma 宫颈鳞癌和腺癌 CHOL Cholangiocarcinoma 胆管癌 COAD Colon adenocarcinoma 结肠癌 COADREAD Colon adenocarcinoma/Rectum adenocarcinoma Esophageal carcinoma 结直...

文章 最尬论文造假：某作者对不存在的基因进行实验，还成功发表SCI！

...后还成功发表了! 如下： 这篇文章发布在了Biochemical and Biophysical Research Communications上， 也就是我们熟知的BBRC，中文名：生物化学和生物物理研究通讯， 这本杂志大家应该都比较熟悉吧， 最新影响因子2.705分，虽然不是很...

问题 GWAS中gapit分析没有结果，命令行输入与屏幕输出如下

...rowseVignettes()'. To cite Bioconductor, see     'citation("Biobase")', and for packages 'citation("pkgname")'. Attaching package: ‘gplots’ The following object is masked from ‘package:multtest’:     wapply The following object is masked from ‘package:stats’:     ...

问题 老师您好，在基因家族分析中，进行共线性分析绘图时，一直出现一下报错，麻烦老师帮忙解答一下

manager@bl8vbox[yu] /biosoft/miniconda/miniconda2/bin/python -m jcvi.graphics.karyotype --format=pdf --figsize=15x15 ph_seqid ph_layout06:27:19 [base] Load file `ph_layout`06:27:19 [base] Load file `PH.bed`06:27:20 [base] Load file `PY.bed`Traceback (most recent call last):  File "/biosoft/minicond...

文章 AI助手帮我整理GEO数据库中样本信息表格

...brary Name tissue tissue_type time_point SRR17839305 GSM5851572 Tumor Head And Neck Oral Cavity Squamous Cell Carcinoma post SRR17839306 GSM5851571 Tumor Head And Neck Oral Cavity Squamous Cell Carcinoma pre SRR17839307 GSM5851570 Tumor Head And Neck Oral Cavity Squamous Cell Carcinoma post SRR17839...

文章 16S扩增子测序后的PICRUSt预测功能分析原理

...表在微生态学旗舰期刊《TheISME Journal》的《Cigarettesmoking and the oral microbiome in a large study of American adults》[2]中，作者就通过PICRUSt预测了吸烟人群和未吸烟人群的口腔菌群，发现共有83个基因功能代谢通路存在显著差异，吸烟大大...

文章 R 安装包：configure: error: proj_api.h not found in standard or given locations.

hecking for strings.h... yeschecking for sys/stat.h... yeschecking for sys/types.h... yeschecking for unistd.h... yeschecking for gdal.h... yeschecking GDAL: linking with --libs only... yeschecking GDAL: /usr/share/gdal/pcs.csv readable... nochecking GDAL: checking whether PROJ is available for link...

文章 8.28接收-毛竹bHLH基因家族分析文章解读及原文献下载

...竹中bHLH家族基因分布在其中16个亚家族中(except 1,7, 13, 14, and 20)。 水稻167个和毛竹中鉴定到的137 个bHLH家族基因，构建系统发育树；如下图所示，以上基因共划分为21 subfamilies，其中毛竹中bHLH家族基因分布在其中16个亚家族中(excep...

文章 linux 硬盘分区 格式化 挂载

...ange a partition's nameddelete a partition   #删除分区ishow detailed information on a partitionllist known partition typesnadd a new partition   # 添加一个分区ocreate a new empty GUID partition table (GPT)pprint the partition table  # 打印分区表qquit without saving changes   #...

问题 基因家族鉴定

...好，请问： The predicted genes were then manually checked using NCBI and UniPort online BLASTP, with threshold of E-value < 10-25. Identified genes were validated by aligning to a nonredundant gene dataset. Identified genes were also validated by BLAST searching against an EST database wit...

问题 老师，请教一下，重测序时对bam文件排序出现问题，提示Exception in thread "main" java.lang.RuntimeException: Invalid lookback distance found.怎么解决呀

问题 安装docker toolbox 报错：Looks like something went wrong in step ´Looking for vboxmanage.exe´… Press any key to continue…

win10家庭版，CPU虚拟化已经开启。

文章 perl测试代码语法高亮

标量字符串 "omicsclass""daf2325""244626" 'omicsgene' 反斜杠 print "A quote \" in a string \n";   #取消双引号 " print 'A quote \' in a string \n';  #取消单引号 '   print "A quote \\ in a string \n";  #取消反斜杠\