...nfiguration failed for package ‘nloptr’
* removing ‘/home/peter/R/x86_64-pc-linux-gnu-library/3.4/nloptr’
ERROR: dependency ‘nloptr’ is not available for package ‘lme4’
* removing ‘/home/peter/R/x86_64-pc-linux-gnu-library/3.4/lme4’
libtool: link: ERROR: no information for var...
...用如下的代码实现。
#!/usr/bin/perl -w
use strict;
my $biotype_file = shift @ARGV;
my $gtf = shift @ARGV;
my $biotype = shift @ARGV;
my %biotype_list;
open my $fh1, $biotype_file or die;
while (<$fh1>) {
chomp;
my @array = split /\t/, $_;
if($array[2]eq $biotype){
...