找到约 15 条结果

文章 Evolview:制作图例

...的图例 命令格式说明: 参数取值参数取值与说明!Groups or !LegendText逗号分隔的文本图例下面包括的内容的名称,如“groupa,groupb,groupc”!LegendStyle or !Stylerect or circle or star图例内容前面的形状类型;默认为矩形!LegendColoror !Colors...

问题 bioconductor常用包 安装

...包一直出问题。 > install.packages("BiocManager")WARNING: Rtools is required to build R packages but is not currently installed. Please download and install the appropriate version of Rtools before proceeding:https://cran.rstudio.com/bin/windows/Rtools/Installing package into ‘C:/Users/L...

问题 使用Launch_PASA_pipeline.pl 脚本报错

...rs used in the prebuilt index.[M::main::6.314*1.00] loaded/built the index for 152 target sequence(s)[M::mm_mapopt_update::7.619*1.00] mid_occ = 834[M::mm_idx_stat] kmer size: 15; skip: 10; is_hpc: 0; #seq: 152[M::mm_idx_stat::8.519*1.00] distinct minimizers: 73053642 (43.22% are singletons); averag...

问题 非模式物种KEGG富集分析报错 X is null so the result will be null

文件路径都检查没有问题,但是运行代码后,出现如下报错

问题 非模式物种KEGG富集分析报错 X is null so the result will be null

文件路径都检查没有问题,但是运行代码后,出现如上报错

文章 topGO分析结果说明

...是体现使用的KS检验方法。 Annotated : number of genes in go.db which are annotated with the GO-term.Significant : number of genes belonging to your input which are annotated with the GO-term.Expected : show an estimate of the number of genes a node of size Annotated would have if the sign...

文章 ERROR 1290 (HY000): The MySQL server is running with the --skip-grant-tables 解决方法

...ot'@'localhost' IDENTIFIED BY '123456'ERROR 1290 (HY000): The MySQL server is running with the --skip-grant-tables option so it cannot execute this statement 这个时候只需要刷新一下权限即可: flush privileges; 再次修改密码尝试: >ALTER USER 'root'@'localhost' IDENT...

问题 您好,想请教一下 linux中 R语言安装magick的包装不上的问题

报错:Error: package or namespace load failed for ‘magick’ in dyn.load(file, DLLpath = DLLpath, ...):  无法载入共享目标对象‘/usr/local/lib64/R/library/00LOCK-magick/00new/magick/libs/magick.so’::   /usr/local/lib64/R/library/00LOCK-magick/00new/magick/libs/magick.so: undef...

问题 基因流分析时,treemix.r报错

...-e 1 -r pop WARNING: ignoring environment value of R_HOME --> Q&A for bioinformatics, please visit the website: https://www.omicsclass.com/ --> R beginners ? I suggest your  learning  R language: https://study.omicsclass.com/index Error in library(R.utils) : there is no package calle...

文章 clusterprofile 支持的物种GO和KEGG富集分析orgdb

...OrgDb org.Hs.eg.dbBioconductor Package MaintainerGenome wide annotation for Human3org.Mm.eg.dbBioconductor Package MaintainerGenome wide annotation for Mouse5org.Rn.eg.dbBioconductor Package MaintainerGenome wide annotation for Rat14org.Dm.eg.dbBioconductor Package MaintainerGenome wide annotatio...

文章 【前沿研究】肺癌转移机制的新靶点-- lncRNA AC026904.1

...)上发表了一篇名为“Long noncoding RNAs AC026904.1 is essential for TGF-β-induced migration and epithelial-mesenchymal transition through functioning as an enhancer of Slug in lung cancer cells”的文章,研究lncRNA AC026904.1在肺癌转移中的作用。发现AC026904.1在转...

问题 基因组注释的镜像是否更新过?

重复序列注释中LTR_retriever -genome contig.fa -inharvest contig.fa.rawLTR.scn -threads ${threads}这一步产生的文件名由contig.fa.LTRlib.fa变成了contig.fa.mod.LTRlib.fa,请问是否镜像中的软件进行了更新?

问题 重测序circos运行失败

...tputfile circos   CONFIGURATION FILE ERROR   Could not parse value for configuration parameter [max] in block [plot]. The   location in the configuration is shown above.   If you are having trouble debugging this error, first read the best practices   tutorial for helpful tips that a...

问题 circos绘制基因组共线性图绘图命令运行问题

...呀?要怎么解决呢?谢谢老师~   To see where Circos looks for the file, use       circos -debug_flag io   To see how configuration files work, create the example image, whose   configuration and data are found in example/. From the Circos distribution   directory,   ...

文章 enrichKEGG_pip.r KEGG 富集分析

...db ann.db                        org.Hs.eg.db or org.Mm.eg.db ,for more info visit:                        https://www.omicsclass.com/article/1244 [optional,                        default: org.Hs.eg.db ]  -t idtype, --idtype idtype                    ...